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Updated: May 28, 2026

Computer Vision-Based Biomass Estimation for Invasive Plants
Published on: February 9, 2024
Automatic Polygon Annotation of Plant Objects for Training Dataset Preparation in Green Biomass Segmentation Tasks
Evgeniy Ivliev1, Valery Gvindjiliya1, Danila Donskoy1
1Laboratory "Modeling and Development of Intelligent Agricultural Engineering Systems", Don State Technical University, Rostov-on-Don 344000, Russia.
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This paper addresses the problem of automated segmentation of plant green biomass in field crop images aimed at improving the accuracy of crop and weed identification. To construct a training dataset for neural network models, an automatic annotation algorithm is proposed, enabling the generation of polygonal object masks without human intervention. The method is based on adaptive analysis of color characteristics of plant fragments with iterative narrowing of the hue range in the HSV color space, combined with an integral quality metric that accounts for the dynamics of contour area and shape. The proposed method achieved an IoU of 93.22% and a DSC of 96.30%, demonstrating a high level of agreement between automatic and manual annotations. The generated masks are used to train segmentation models of the YOLO11-seg family. Models of different scales (n, s, m, l, x) were trained and evaluated using standard metrics, including Intersection over Union (IoU), mAP@0.5, mAP@0.5-0.95, F1-score, and Precision-Recall (PR) curves. Experimental results demonstrate that models trained on automatically generated annotations achieve stable segmentation performance of plant green biomass. The best results were obtained with the YOLO11m-seg model, achieving an F1-score of 0. 772. The results confirm the effectiveness of the proposed approach and demonstrate acceptable segmentation quality, supported by both quantitative metrics and visual analysis. The developed automatic annotation algorithm can be used to expand training datasets in computer vision tasks for agricultural applications.