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Updated: May 28, 2026

Revealing the Ferroptotic Phenotype of Medulloblastoma
Published on: March 15, 2024
NFE2L2-Associated Ferroptosis Resistance Reshapes the Tumor Immune Microenvironment and Guides Therapeutic Strategies
Yihan Lin1, Haojie Yu1, Ying Wang1
1Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Clinical Research Center for Oral Diseases of Zhejiang Province, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Hangzhou 310006, China.
Abstract:
Prostate adenocarcinoma (PRAD) poses a significant challenge due to therapy resistance and an immunosuppressive tumor microenvironment (TME). Ferroptosis has emerged as a therapeutic vulnerability, yet its immunomodulatory role in PRAD remains elusive. Here, we employed a multi-omics approach-integrating bulk RNA-seq (498 tumors), single-cell RNA-seq (68,322 cells), and spatial transcriptomics (19,483 spots)-to decode the ferroptosis-immune landscape. We derived a robust 16-gene ferroptosis signature that predicted biochemical recurrence (C-index = 0.76) and validated it in two independent cohorts. Crucially, high-risk tumors exhibited a "cold" immunosuppressive TME enriched in regulatory T cells and M2 macrophages, alongside elevated immune checkpoints (HAVCR2, CTLA4, PDCD1). Single-cell and virtual knockout analyses revealed that cancer epithelial cells evade ferroptosis via NFE2L2-associated antioxidant defenses, which strongly correlates with immune exclusion. Spatial transcriptomics further demonstrated spatially organized vulnerabilities, with ferroptosis-resistant tumor cores and immune-infiltrated invasive margins. To identify therapeutic interventions, we utilized drug response modeling and molecular docking, prioritizing RSL3, Atovaquone (targeting NOX4 (NADPH oxidase 4)/DHODH), and Sorafenib (targeting TrxR1 (thioredoxin reductase 1, encoded by TXNRD1)) as potent agents with potential ferroptosis-modulatory activity. Collectively, our findings demonstrate that NFE2L2-associated ferroptosis resistance shapes immune evasion in PRAD. Targeting ferroptosis regulators provides a compelling therapeutic rationale to remodel the TME and synergize with immune checkpoint blockade.
Insights
Prostate cancer cells resist ferroptosis by activating antioxidant defenses, leading to an immune-excluded tumor microenvironment. Targeting ferroptosis regulators may overcome therapy resistance and enhance immunotherapy effectiveness.
Area of Science:
- Oncology
- Immunology
- Genomics
Background:
- Prostate adenocarcinoma (PRAD) is challenging due to therapy resistance and an immunosuppressive tumor microenvironment (TME).
- Ferroptosis is a potential therapeutic vulnerability, but its role in PRAD immunity is unclear.
Purpose of the Study:
- To investigate the ferroptosis-immune landscape in PRAD using multi-omics data.
- To identify ferroptosis-related biomarkers and therapeutic targets for PRAD.
Main Methods:
- Integrated bulk RNA-seq, single-cell RNA-seq, and spatial transcriptomics.
- Developed a 16-gene ferroptosis signature and performed virtual knockout analyses.
- Utilized drug response modeling and molecular docking to identify potential therapies.
Main Results:
- A 16-gene ferroptosis signature predicted biochemical recurrence in PRAD.
- High-risk PRAD tumors showed a cold, immunosuppressive TME with elevated immune checkpoints.
- NFE2L2-associated ferroptosis evasion correlated with immune exclusion and spatial immune organization.
Conclusions:
- NFE2L2-driven ferroptosis resistance contributes to immune evasion in PRAD.
- Targeting ferroptosis regulators offers a strategy to remodel the TME and synergize with immunotherapy.
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