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Updated: May 29, 2026

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
08:03

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations

Published on: December 7, 2021

The Gene Taxonomic Prevalence (GeTPrev) Pipeline for Scalable Gene Prevalence Estimation Across Bacterial Taxa

Weifan Wu1, Aaron M Dickey2, Jessie L Vipham3

  • 1United States Meat Animal Research Center, United States Department of Agriculture Agricultural Research Service, 844 Road 313, Clay Center, NE 68933, United States of America; Department of Animal Sciences and Industry, Kansas State University, Manhattan, KS 66506, United States of America; Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL 32611, United States of America.

Journal of Food Protection
|May 27, 2026
PubMed

Keywords:
Bacterial genomesBioinformatics pipelineGene prevalenceHigh-throughput analysis

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