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Updated: Jun 4, 2026

Establishment of a Minimally Invasive Rat Model of Pulmonary Embolism Using Autologous Blood Clots
Published on: October 25, 2024
A Promptable 3D-CT Foundation Model-Based Approach for Pulmonary Embolism
K Le Floch1,2, E Ferreres3, J Khlaut4,3
1Department of Vascular and Oncological interventional Radiology, Hôpital Européen Georges Pompidou, HeKA PRAIRIE-PSAI, INRIA Paris, Paris, France. korentin.lefloch@aphp.fr.
Insights
ClotIA, an AI tool, rapidly quantifies pulmonary embolism (PE) clot volume using computed tomography angiography (CTA). This automated segmentation correlates with PE severity markers, improving clinical assessment.
Area of Science:
- Radiology and Medical Imaging
- Artificial Intelligence in Medicine
- Cardiovascular Disease Research
Background:
- Blood clot volume (BCV) is a key biomarker for pulmonary embolism (PE) severity.
- Manual segmentation of thrombi on computed tomography angiography (CTA) is time-consuming, limiting clinical utility.
- Objective biomarkers are crucial for accurate PE assessment and treatment guidance.
Purpose of the Study:
- To evaluate ClotIA (Clot Interventional AI), a foundation model (FM)-based approach for rapid and interactive clot segmentation in PE.
- To assess the feasibility of AI-driven BCV quantification for clinical application.
- To overcome the limitations of manual segmentation in PE assessment.
Main Methods:
- A foundation model (RAPSv2) was fine-tuned on 309 PE patients from the RSPECT dataset.
- Segmentation performance was measured using the Dice similarity coefficient (DSC) and compared to nnUNet.
- The AI-predicted BCV was correlated with established imaging biomarkers of PE severity.
Main Results:
- ClotIA achieved a mean DSC of 0.83 after guided refinement, outperforming baseline and nnUNet.
- Predicted BCV demonstrated strong agreement with reference volumes (r=0.995).
- AI-quantified BCV significantly correlated with right ventricle/left ventricle (RV/LV) diameter (r=0.62) and volume ratios (r=0.68).
Conclusions:
- ClotIA facilitates rapid and reproducible 3D quantification of PE thrombi.
- The AI tool's findings correlate with established PE severity markers.
- ClotIA provides a foundation for translating novel biomarkers into clinical practice for PE management.
Purpose:
Blood clot volume (BCV), defined as the total three-dimensional (3D) volume of the thrombus on computed tomography angiography (CTA), is an objective biomarker of pulmonary embolism (PE) severity whose clinical use is limited by time-consuming manual segmentation. This study evaluates ClotIA (Clot Interventional AI), a foundation model (FM)-based approach designed for rapid and interactive clot segmentation in PE.
Materials And Methods:
RAPSv2, a foundation model derived from SAM2, was fine-tuned on a stratified sample of 309 patients from the RSPECT dataset (2020). Segmentation performance was evaluated using the Dice similarity coefficient (DSC) and compared to that of nnUNet (no-new-Net). The predicted BCV was correlated with imaging biomarkers of PE severity.
Results:
ClotIA achieved a mean DSC of 0.83 ± 0.06 after guided refinement, compared to 0.79 ± 0.10 at baseline (p < 0.001) and 0.81 ± 0.13 for nnUNet (p < 0.001). The predicted BCV showed strong agreement with the reference volume (r = 0.995; mean bias + 0.12 mL) and was significantly correlated with RV/LV diameter ratio (r = 0.62, p < 0.001) and RV/LV volume ratio (r = 0.68, p < 0.001).
Conclusion:
ClotIA enables rapid and reproducible 3D quantification of pulmonary embolism thrombi, correlating with established severity markers and providing the necessary basis for translating emerging biomarkers into clinical practice.
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