Related Experiment Video
Updated: Jun 6, 2026

05:59
New Framework for Understanding Cross-Brain Coherence in Functional Near-Infrared Spectroscopy (fNIRS) Hyperscanning Studies
Published on: October 6, 2023
Causal and directional elements of global brain dynamics.
John Kochalka1,2, Anish Mitra3, Alexander D White1
1Department of Bioengineering, Stanford University, Stanford, CA, USA.
Biorxiv : the Preprint Server for Biology
|June 5, 2026
Summary
Researchers discovered conserved directional patterns in brain activity, revealing a causal control hierarchy within cortical networks. These large-scale dynamics are crucial for sensorimotor behavior and robust to state changes.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Systems Neuroscience
Background:
- Mammalian cognition relies on coordinated neural activity across large-scale brain networks.
- Principles governing this large-scale neural integration are not well understood.
Purpose of the Study:
- To uncover conserved spatiotemporal regularities in spontaneous cortex-wide neural activity.
- To identify governing principles of large-scale neural integration in the mammalian brain.
Main Methods:
- Developed novel genetically-encoded activity sensors for cortex-wide neural recording over long timescales.
- Applied unbiased computation to identify directional spatiotemporal elements in neural activity.
- Utilized patterned optogenetic stimulation and activity imaging to test causal rules.
- Investigated drug effects on neural dynamics and element structure.
- Employed all-optical sensing/control in a visual detection task.
Main Results:
- Identified conserved directional spatiotemporal patterns (directional elements) across neuronal cell types and frequency spectra, including gamma rhythms.
- Discovered that the propagation structure of these elements encodes a causal control hierarchy, with source regions driving recruitment.
- Demonstrated robustness of directional element structure to psychotropic drugs, despite reshaping of network dynamics.
- Showed contributions of these conserved dynamics to enhanced sensorimotor behavioral performance.
Conclusions:
- Conserved large-scale cortical dynamics, characterized by directional elements and a causal hierarchy, play a fundamental role in mammalian cognition.
- These principles of neural integration are stable across different neural and behavioral states.
- Targeting these dynamics offers insights into neural computation and sensorimotor behavior.
Related Concept Videos
Organization of the Brain
The brain is an integral component of the nervous system and serves as the center for processing sensory inputs, making decisions, and directing bodily actions. This complex organ is organized into three primary sections: the hindbrain, midbrain, and forebrain, each responsible for a range of vital functions.
Hindbrain
The hindbrain, located at the base of the brain, plays a vital role in regulating automatic processes that sustain life. It includes the medulla oblongata, which is essential for...
Hindbrain
The hindbrain, located at the base of the brain, plays a vital role in regulating automatic processes that sustain life. It includes the medulla oblongata, which is essential for...
Cerebral Hemispheres
The human brain, a complex organ, is functionally divided into two cerebral hemispheres—left and right. These hemispheres are interconnected by a structure of paramount importance, the corpus callosum. This substantial bundle of neural fibers is not just a bridge between the hemispheres but a crucial element for the brain's comprehensive functioning. It enables efficient communication between the two hemispheres, allowing each side of the brain to control and receive sensory and motor...
Lateralization
Brain lateralization refers to the division of mental processes and functions between the two hemispheres of the brain, a phenomenon that optimizes neural efficiency and underpins complex abilities in humans. This specialization allows each hemisphere to perform tasks where it has a comparative advantage, facilitating more refined cognitive capabilities across different domains.
Anatomy of the Brain: Major Regions
The brain is the most complex organ in the human body. It consists of four main parts: the cerebrum, diencephalon, cerebellum, and brainstem.
The cerebrum is the largest section of the brain and divides into left and right hemispheres, separated by a deep fissure. The cerebral outer layer of grey matter — the cerebral cortex — comprises elevations called gyri and shallow groves called sulci. The inner portion of white matter includes long nerve fibers known as axons, which connect various areas...
The cerebrum is the largest section of the brain and divides into left and right hemispheres, separated by a deep fissure. The cerebral outer layer of grey matter — the cerebral cortex — comprises elevations called gyri and shallow groves called sulci. The inner portion of white matter includes long nerve fibers known as axons, which connect various areas...
Lobes of the Cerebrum
The cerebral cortex, a critical structure of the brain, is intricately divided into two hemispheres, each consisting of four distinct lobes: occipital, temporal, frontal, and parietal. These lobes function cooperatively to regulate various cognitive and sensory functions, forming the basis of our complex neural capabilities.
Frontal lobe
The frontal lobes, located behind the forehead, are the command center of our brain, controlling personality, intelligence, and voluntary muscle movements.
Frontal lobe
The frontal lobes, located behind the forehead, are the command center of our brain, controlling personality, intelligence, and voluntary muscle movements.
Gut-Brain Axis
The gut–brain axis is a bidirectional communication system that connects the gastrointestinal tract and the brain. This interaction is mediated through multiple pathways, including the vagus nerve, hormonal signals, immune responses, and chemical messengers produced by gut microbes.Microbial Contributions to Brain FunctionGut microbiota contributes significantly to brain function by producing neuroactive compounds. These include neuroactive compounds that influence neurotransmitters such as...
