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Decoding the role of polyamine metabolism in lung adenocarcinoma prognosis: A triangulated approach combining
Hua Yang1, Lemeng Zhang1, Jianhua Chen1
1Department of Thoracic Oncology, Hunan Cancer Hospital, Changsha, Hunan 410017, P.R. China.
Abstract:
The progression of lung adenocarcinoma (LUAD) is influenced by polyamine metabolism, which modulates antitumor immunity, although the underlying mechanisms remain unclear. The present study investigates the role of polyamine metabolism-related genes (PMRGs) in LUAD using transcriptomic data, single-cell RNA sequencing (scRNA-seq) and Mendelian randomization. Differentially expressed PMRGs were identified through differential expression analysis and weighted gene co-expression network analysis. Prognostic genes were selected via Cox regression and least absolute shrinkage and selection operator regression to construct a risk model. Immune infiltration, machine learning and scRNA-seq were employed to explore molecular mechanisms whilst reverse transcription-quantitative PCR (RT-qPCR) validated gene expression in LUAD tissues. A nomogram incorporating risk scores assisted in predicting LUAD prognosis (area under the curve >0.6). Distinct immune cell profiles, particularly involving B cells and CD4+ T cells, were observed between high- and low-risk groups. Drug sensitivity analysis identified 15 drugs with differential responses. Epithelial cells emerged as a key cluster, with dynamic changes in calcium voltage-gated channel auxiliary subunit α2δ2 (CACNA2D2) expression during pseudotime. RT-qPCR confirmed the downregulation of prognostic genes in LUAD. A polyamine metabolism-related prognostic signature (CACNA2D2, adenoreceptor β-1, immunoglobulin superfamily member 10 and carbonic anhydrase 4) associated with the tumor microenvironment was established, offering potential for enhanced prognosis prediction in LUAD.