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Updated: Jun 10, 2026

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness
Published on: December 6, 2024
Beyond language: generative artificial intelligence as a general computing model for medicine
Arkadiusz Sitek1, David W Bates2
1Radiology Department, Massachusetts General Hospital, Boston, MA, USA; Harvard Medical School, Boston, MA, USA.
Direct tokenisation of medical data, like lab results and medications, allows AI models to learn patient health timelines directly. This approach enhances AI accuracy and supports privacy-preserving collaboration for equitable healthcare.
Area of Science:
- Artificial Intelligence in Medicine
- Health Informatics
- Computational Health
Background:
- Traditional AI models often rely on textual translation of medical data, limiting their ability to capture complex temporal health patterns.
- Lack of direct processing of structured medical data hinders the development of accurate and personalized patient care models.
Purpose of the Study:
- To advocate for direct tokenisation of medical data for transformer-based AI models.
- To explore the potential of tokenised representations for learning patient health timelines and improving clinical decision-making.
- To propose a framework for privacy-preserving collaborative development of AI models in healthcare.
Main Methods:
- Direct tokenisation of discrete medical data units (e.g., lab results, medications, vital signs).
- Utilisation of transformer-based models, such as Enhanced Transformer for Health Outcome Simulation, for forecasting health timelines.
- Development of a privacy-preserving model-sharing framework for local training and sharing of trained models.
Main Results:
- Tokenisation enables transformer models to learn directly from the temporal structure of patient health timelines.
- The proposed approach facilitates more accurate and personalised patient care.
- Privacy-preserving model sharing allows for collaborative development across institutions, enhancing data diversity.
Conclusions:
- Embracing tokenised representations is crucial for developing scalable, multimodal, and equitable artificial intelligence in medicine.
- Direct tokenisation overcomes limitations of textual translation, improving AI's understanding of patient health trajectories.
- Collaborative efforts and diverse datasets are essential for advancing fairness, generalisability, and equity in healthcare AI.
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