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Targeting DNA-PK: medicinal chemistry insights into small-molecule inhibitor discovery and optimisation
Elle Watson1, Jack R R Hutchinson1, Suzannah J Harnor1
1Cancer Research Horizons Newcastle Drug Discovery Unit, Chemistry, School of Natural and Environmental Sciences, Newcastle University Bedson Building Newcastle upon Tyne NE1 7RU UK celine.cano@newcastle.ac.uk.
Abstract:
DNA-dependent protein kinase (DNA-PK) is a central regulator of non-homologous end joining (NHEJ), the dominant pathway for DNA double-strand break repair in mammalian cells. Aberrant DNA-PK activity is frequently associated with tumour progression as well as chemo- and radio-resistance, positioning DNA-PK as an attractive therapeutic target in cancer. Over the past few years, extensive medicinal chemistry efforts have enabled the optimisation of small molecule inhibitors of DNA-PK, from early, non-selective chemical probes into highly potent, selective and orally bioavailable compounds. This review provides a comprehensive overview of the discovery and optimisation of DNA-PK inhibitors, highlighting key structure-activity relationships, synthetic strategies and pharmacological profiles across several inhibitor generations. Representative scaffolds, including chromen-4-one derivatives and next-generation clinical candidates such as AZD7648 and VX-984, are discussed. Finally, we summarise current clinical progress in early phase trials and remaining challenges, including achieving tolerability and efficacy when compounds are administered both as a single agent, or in combination. Taken together, this review highlights both the therapeutic potential of DNA-PK-targeting inhibition and the challenges encountered in clinical development, providing a framework to guide future strategies for DNA-PK-targeted therapeutics.
Insights
DNA-dependent protein kinase (DNA-PK) inhibitors are crucial for cancer therapy. This review details the development of potent DNA-PK inhibitors, discussing their therapeutic potential and clinical challenges.
Area of Science:
- Biochemistry
- Medicinal Chemistry
- Oncology
Background:
- DNA-dependent protein kinase (DNA-PK) regulates DNA double-strand break repair via non-homologous end joining (NHEJ).
- Dysregulated DNA-PK activity correlates with cancer progression and resistance to therapies, identifying it as a key therapeutic target.
Purpose of the Study:
- To provide a comprehensive overview of the discovery and optimization of DNA-dependent protein kinase (DNA-PK) inhibitors.
- To highlight structure-activity relationships, synthetic routes, and pharmacological profiles of various DNA-PK inhibitor generations.
Main Methods:
- Review of medicinal chemistry efforts in optimizing DNA-PK inhibitors.
- Analysis of structure-activity relationships and synthetic strategies for inhibitor development.
- Evaluation of pharmacological profiles and clinical progress of representative DNA-PK inhibitors.
Main Results:
- Significant advancements have been made in developing potent, selective, and orally bioavailable DNA-PK inhibitors.
- Key scaffolds and clinical candidates like AZD7648 and VX-984 have emerged.
- Early-phase clinical trials are underway, with ongoing evaluation of tolerability and efficacy.
Conclusions:
- DNA-PK inhibitors demonstrate significant therapeutic potential in cancer treatment.
- Challenges remain in achieving optimal tolerability and efficacy, particularly in combination therapies.
- This review offers a framework for future development of DNA-PK-targeted therapeutics.
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