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Cloud-to-Edge Deployment of Optimized nnU-Net for Ischemic Stroke Lesion Segmentation on Resource-Constrained
Daniel Alcaraz-Ortiz1, Juan Francisco Zapata-Pérez1, Juan Martinez-Alajarin1
1Escuela Técnica Superior de Ingeniería Industrial, Campus Muralla del Mar, Universidad Politécnica de Cartagena, European University of Technology EUT+, C/Doctor Fleming, s/n, 30202 Cartagena, Spain.
Deploying advanced 3D nnU-Net v2 models for ischemic stroke segmentation on edge devices is technically feasible. Optimized configurations show promise for real-time clinical applications, despite minor metric reductions.
Area of Science:
- Medical image analysis
- Artificial intelligence in healthcare
- Neurology
Background:
- Ischemic stroke necessitates rapid, accurate lesion assessment for effective treatment.
- The "Time is Brain" principle highlights the urgency in stroke care.
- Advanced AI models like nnU-Net v2 offer state-of-the-art medical image segmentation but face deployment challenges in resource-constrained settings.
Purpose of the Study:
- To assess the technical feasibility of deploying a 3D nnU-Net v2 model from the cloud to an embedded edge device.
- To evaluate the performance and efficiency of a Cloud-to-Edge optimization pipeline for medical image segmentation.
Main Methods:
- A 3D nnU-Net v2 model was optimized for deployment on a resource-constrained embedded device using a Cloud-to-Edge pipeline.
- Segmentation performance was evaluated using overlap-based metrics (e.g., Dice score).
- Inference speed and power consumption were measured for different precision configurations (FP32, FP16) using TensorRT.
Main Results:
- Edge deployment resulted in a decrease in segmentation metrics (Dice from ~0.78 to 0.67) compared to cloud-based inference.
- TensorRT FP32 and FP16 inference showed comparable segmentation performance, indicating minimal degradation with reduced precision.
- The optimized FP16 configuration achieved a processing time of 10.2 seconds per 3D volume (33% faster than FP32) at low power consumption (10-13 W).
Conclusions:
- The study demonstrates the preliminary technical feasibility of running advanced 3D volumetric segmentation models on low-power edge hardware.
- Optimized edge deployment offers a potential pathway for real-time stroke imaging analysis at the point-of-care.
- Further validation, including external datasets and clinical assessment, is required before clinical application.
Related Concept Videos
Ischemic Stroke l: Introduction
Ischemic Stroke ll: Pathophysiology
Transient Ischemic Attack l: Introduction