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Updated: Jun 13, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
A clinical prediction rule for myotonia permanens associated with the SCN4A p.Gly1306Glu variant
Daniela Regonesi Polanco1,2, Carlos Jaque Almendras3, Marcela Lagos Lucero4
1Sección de Neurología, División de Pediatría, Pontificia Universidad Católica de Chile, Diagonal Paraguay 362, Santiago, Región Metropolitana, Chile.
Introduction:
Myotonia permanens (MP), a life-threatening condition, is prevalent in Chile, and is frequently associated with the SCN4A p.Gly1306Glu variant (exon 22), likely due to a founder effect in this population. Low clinical suspicion and the high cost of genetic testing contribute to delayed diagnosis and impaired quality of life. This study aimed to develop a clinical prediction rule (CPR) for early MP-p.Gly1306Glu detection specially in Chile, and confirm diagnosis through genetic testing.
Methods:
This cross-sectional study was conducted at five Chilean hospitals and included healthy controls and patients with non-dystrophic myotonia (NDM). Participants were classified as controls, MP-p.Gly1306Glu, or non-permanens myotonia (NPM). Diagnosis was confirmed by SCN4A exon 22 sequencing or a gene panel (SCN4A, CLCN1). Fisher's exact test and logistic regression were used to identify clinical predictors of MP.
Results:
A total of 19 controls and 17 patients with NDM (MP-p.Gly1306Glu/NPM = 8/9; mean age: 36 years) were included. Four predictors of MP-p.Gly1306Glu were identified: eyelid myotonia before age 2 (predictive value [PV] = 100%), myotonic discharges ≥28/30 s (PV = 95%), laryngospasm before age 2 (PV = 94%), and generalized myotonia before age 5 (PV = 88%). If all four predictors are present, MP-p.Gly1306Glu is highly probable and SCN4A exon 22 sequencing is recommended. If one to three predictors are present, targeted sequencing or a gene panel is advised, depending on clinical context.
Conclusion:
This CPR may facilitate early diagnosis of MP-p.Gly1306Glu and improve clinical outcomes, especially in Chile, and possibly other resource-limited settings, by guiding timely genetic confirmation and management. These predictors may support diagnostic criteria for MP/NPM, and guide future clinical trial design.
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