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Optimizing risk cutoffs in joint endoscopic screening for upper gastrointestinal cancers: a data-driven approach from
Dongze Chen1, Zhen Liu1, Mengfei Liu1
1Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education/Beijing), Department of Genetics, Peking University Cancer Hospital & Institute, Beijing, China.
Background:
Although risk prediction models for esophageal cancer (EC) and gastric cancer (GC) exist, determining appropriate cutoffs under predetermined endoscopy capacity remains challenging. We aimed to develop a strategy for selecting optimal high-risk cutoffs in model-based joint screening for EC and GC.
Methods:
We built and validated the strategy based on four population-based screening cohorts from different regions of China and two diagnostic models for predicting prevalent EC and GC. The proposed strategy consisted of two steps: determining the relative high-risk coverage depending on the incidence rate ratio (IRR) of EC to GC and identifying the optimal cutoffs through an exhaustive search approach.
Results:
Totally, 43,156 individuals who had undergone endoscopic examination were included in the analysis. Taking two opportunistic screening cohorts as a benchmark dataset, we built the strategy for selecting optimal cutoffs for EC and GC at an expected total high-risk coverage of 50%. The results showed that under different IRR scenarios (range: 0.2-5.0), the optimal cutoffs could be identified by this strategy to achieve a total high-risk coverage of 50% and the detection rates of both EC and GC were improved (detection rate ratios range: 1.72-5.77). External validation results indicated that the high-risk cutoffs determined by this strategy are applicable to other populations. Finally, we developed a user-friendly online tool to aid cutoff selection ( https://pkucr.shinyapps.io/cutoff_selection/ ).
Conclusions:
This study provided a strategy for the selection of high-risk cutoffs in EC and GC joint screening, which may hold promise for advancements in model-based joint screening.
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