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Related Concept Videos

Lewis Acids and Bases02:33

Lewis Acids and Bases

In 1923, G. N. Lewis proposed a generalized definition of acid-base behavior in which acids and bases are identified by their ability to accept or to donate a pair of electrons and form a coordinate covalent bond.
A coordinate covalent bond (or dative bond) occurs when one of the atoms in the bond provides both bonding electrons. For example, a coordinate covalent bond occurs when a water molecule combines with a hydrogen ion to form a hydronium ion. A coordinate covalent bond also results when...
Lewis Acids and Bases02:16

Lewis Acids and Bases

This lesson delves into Lewis acids and bases in the context of the octet rule for electron-deficient compounds. Here, the concept is discussed, emphasizing the group 13 elements like boron or aluminium. Since group 13 elements possess three valence electrons, they form trivalent compounds with a sextet of electrons and a vacant orbital for the central atom. Consequently, these electron-deficient compounds accept electrons from other species to complete their octet in a chemical reaction. They...
Formation of Complex Ions03:45

Formation of Complex Ions

A type of Lewis acid-base chemistry involves the formation of a complex ion (or a coordination complex) comprising a central atom, typically a transition metal cation, surrounded by ions or molecules called ligands. These ligands can be neutral molecules like H2O or NH3, or ions such as CN− or OH−. Often, the ligands act as Lewis bases, donating a pair of electrons to the central atom. These types of Lewis acid-base reactions are examples of a broad subdiscipline called coordination...
ATP Driven Pumps I: An Overview01:27

ATP Driven Pumps I: An Overview

ATP-driven pumps, also known as transport ATPases, are integral membrane proteins. They have binding sites for ATP located on the membrane's cytosolic side and the ion-conducting domain in the transmembrane region. These pumps use the free energy released from ATP hydrolysis to move the solutes across cell membranes against an electrochemical gradient.
There are four main types of ATP-driven pumps - P-type, V-type, F-type, and ABC transporter. All these pumps are of varying complexities and are...
Leveling Effect01:29

Leveling Effect

In acid-base chemistry, the leveling effect refers to the limitation imposed by the solvent on the strength of acids and bases in solution. When a base stronger than the solvent's conjugate base is used, it deprotonates the solvent until the base is entirely consumed, making it ineffective against weaker acids. Conversely, an acid stronger than the solvent's conjugate acid protonates the solvent until the acid is depleted, rendering it ineffective against weaker bases. Essentially, the solvent...
Phosphodiester Linkages01:01

Phosphodiester Linkages

Overview
Phosphodiester bond forms when a phosphoric acid molecule (H3PO4) links with two hydroxyl groups (–OH) of two other molecules, forming two ester bonds. Two water molecules are released in this process. The phosphodiester bond is commonly found in nucleic acids (DNA and RNA) and plays a critical role in their structure and function.
Phosphodiester Bonds Link Nucleotides Together
DNA and RNA are polynucleotides or long chains of nucleotides that are linked together. A nucleotide is...

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Updated: Jun 18, 2026

Insights into the Interactions of Amino Acids and Peptides with Inorganic Materials Using Single-Molecule Force Spectroscopy
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Published on: March 6, 2017

Lewis acid-base interaction-driven phosphodiester hydrolysis in single-atom nanozymes.

Yimeng Wang1, Zhiling Zhu2, Lina Wang1

  • 1College of Environment and Safety Engineering, Qingdao University of Science and Technology, Qingdao, Shandong 266042, China. lnwang2006@163.com.

Chemical Communications (Cambridge, England)
|June 17, 2026
PubMed
Summary

Researchers designed a single-atom nanozyme using boron-modulated electronic polarization. This novel material effectively inhibits bacterial biofilm formation by activating phosphodiester bonds through a Lewis acid-base microenvironment.

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Published on: February 5, 2020

Area of Science:

  • Materials Science
  • Nanotechnology
  • Biotechnology

Background:

  • Bacterial biofilms pose significant challenges in healthcare and industry.
  • Developing novel antimicrobial agents is crucial for combating biofilm-related infections.
  • Single-atom nanozymes offer unique catalytic properties for biomedical applications.

Purpose of the Study:

  • To design and synthesize a single-atom nanozyme with a tailored microenvironment.
  • To investigate the catalytic mechanism for phosphodiester bond activation.
  • To evaluate the efficacy of the nanozyme in inhibiting bacterial biofilm formation.

Main Methods:

  • Boron-modulated electronic polarization of graphitic carbon nitride (g-C6N6) to create isolated Ce sites.
  • Characterization of the nanozyme's structure and electronic properties.
  • In vitro assays to assess phosphodiester bond hydrolysis and biofilm inhibition.

Main Results:

  • A single-atom nanozyme featuring isolated Ce sites within a Lewis acid-base microenvironment was successfully synthesized.
  • The nanozyme demonstrated efficient activation of phosphodiester bonds by lowering the hydrolysis energy barrier.
  • Significant inhibition of bacterial biofilm formation was observed.

Conclusions:

  • The designed single-atom nanozyme exhibits potent antibiofilm activity.
  • The Lewis acid-base microenvironment is key to the nanozyme's catalytic mechanism.
  • This study presents a promising strategy for developing advanced nano-catalysts against bacterial biofilms.