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Integrated pan-cancer profiling highlights OSR2 as a prognostic indicator and immune-associated biomarker
Lei Tang1, Qiqi Chen1, Chunmiao Han1
1Department of Pathology, The Affiliated Cancer Hospital of Zhengzhou University and Henan Cancer Hospital, 127 Dongming Road, Zhengzhou, 450008, China.
Background:
Odd-skipped-related 2 (OSR2), encoded by the OSR2 gene, has been reported to function as a checkpoint associated with CD8⁺ T-cell exhaustion in the tumor microenvironment of solid malignancies, suggesting its potential as a therapeutic target to improve immunotherapeutic responses. Nevertheless, the molecular and clinical significance of OSR2 across diverse cancer types has not yet been systematically investigated, and its pan-cancer expression profile, prognostic implications, and associations with tumor immunity remain to be fully elucidated.
Methods:
In this study, we integrated datasets from The Cancer Genome Atlas (TCGA), the Genotype-Tissue Expression (GTEx) portal, and the Human Protein Atlas to construct a systematic pan-cancer profile of OSR2. The prognostic value of OSR2 was comprehensively assessed using univariate Cox regression, survival analysis, and receiver operating characteristic (ROC) curve analysis. In addition, we performed an in-depth analysis of the relationships between OSR2 and multiple molecular and immunological features, including copy number variation (CNV), DNA methylation, tumor mutational burden (TMB), microsatellite instability (MSI), immune-related gene expression, immune cell infiltration, and drug sensitivity, with the aim of exploring its potential immunological associations with the tumor microenvironment.
Results:
OSR2 expression was significantly upregulated or downregulated in the majority of tumor tissues relative to normal counterparts and exhibited distinct cancer-type-specific patterns across clinical stages. CNV alterations and aberrant DNA methylation were closely associated with abnormal OSR2 mRNA expression in multiple cancers. Prognostic analyses indicated that OSR2 expression was significantly associated with overall survival, disease-specific survival, disease-free interval, and progression-free interval across multiple cancer types, showing either risk-associated or protective associations in a tumor-context-dependent manner. Furthermore, OSR2 expression showed strong associations with immune cell infiltration, particularly T-cell subsets, and was significantly correlated with the expression of multiple immune checkpoint-related genes across diverse malignancies. OSR2 expression was also closely associated with TMB, MSI, and sensitivity to multiple anticancer agents.
Conclusion:
Taken together, these findings suggest that OSR2 is associated with prognosis and immune-related features across multiple cancer types. OSR2 may be linked to features of the tumor immune microenvironment through its relationships with immune cell infiltration, immune checkpoint gene expression, and genomic instability, and thus may serve as a candidate biomarker for further investigation in cancer immunotherapy.
Insights
Odd-skipped-related 2 (OSR2) expression varies across cancers and impacts patient survival and immune cell infiltration. This suggests OSR2 may be a valuable biomarker for cancer immunotherapy, influencing tumor microenvironment and treatment response.
Area of Science:
- Oncology
- Immunology
- Genetics
Background:
- Odd-skipped-related 2 (OSR2) is implicated in CD8+ T-cell exhaustion within the tumor microenvironment.
- OSR2 presents potential as a therapeutic target to enhance cancer immunotherapy efficacy.
- Systematic investigation of OSR2's pan-cancer significance, prognostic value, and immune associations is lacking.
Purpose of the Study:
- To construct a comprehensive pan-cancer profile of OSR2 expression and its clinical implications.
- To investigate the associations between OSR2 and tumor immunity, including immune cell infiltration and gene expression.
- To explore OSR2's potential as a biomarker in cancer immunotherapy.
Main Methods:
- Integrated analysis of TCGA, GTEx, and Human Protein Atlas datasets for OSR2 expression profiling.
- Prognostic assessment using survival analysis and ROC curves.
- Exploration of OSR2's correlation with genomic alterations (CNV, methylation), TMB, MSI, immune features, and drug sensitivity.
Main Results:
- OSR2 expression patterns are cancer-type-specific and stage-dependent, with significant upregulation or downregulation observed.
- Abnormal OSR2 expression is linked to CNV alterations and DNA methylation.
- OSR2 expression significantly correlates with patient survival outcomes (OS, DSS, DFI, PFI) and is associated with immune cell infiltration, T-cell subsets, and immune checkpoint gene expression.
- OSR2 is also linked to TMB, MSI, and sensitivity to anticancer agents.
Conclusions:
- OSR2 is a significant factor in cancer prognosis and is associated with immune-related features across multiple cancer types.
- OSR2's influence on the tumor immune microenvironment may be mediated by immune cell infiltration, immune checkpoint genes, and genomic instability.
- OSR2 emerges as a promising candidate biomarker for advancing cancer immunotherapy research.
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