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Integration of transcriptome and mendelian randomization elucidates the protective role of aspirin in pulmonary
Wei Tan1, Li Zhang1, Shanmei Wang2
1Department of Respiratory and Critical Care Medicine, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China.
Background:
Pulmonary tuberculosis (PTB) is a chronic respiratory infectious disease with suboptimal treatment outcomes in some patients. The potential protective effect of aspirin against PTB and its underlying mechanisms remain unclear.
Methods:
Two-sample Mendelian randomization (MR) was used to evaluate the association between aspirin use and PTB risk. Aspirin target genes from DrugBank were further assessed by summary-data-based Mendelian randomization (SMR) using eQTLGen and the Iceland dataset. Transcriptomic analysis compared gene expression between TB progressors and nonprogressors, and Kaplan-Meier analysis examined associations between gene expression and TB progression among household contacts. In vitro experiments were performed in BCG-stimulated monocytes.
Results:
MR analysis showed that aspirin use was associated with reduced PTB risk (IVW: OR = 0.06, 95% CI: 0.01-0.51, p = 0.01). pQTL-based SMR identified significant associations of TNFAIP6 and NEU1 with PTB (p = 0.02, p-FDR = 0.03; p = 9.6 × 10⁻3, p-FDR = 0.03, respectively), whereas eQTL-based SMR showed no significant associations. Transcriptomic analysis revealed higher TNFAIP6 and NEU1 expression in progressors than in nonprogressors (p = 6.1 × 10⁻⁶ and p = 0.02). Kaplan-Meier analysis indicated that elevated TNFAIP6 and NEU1 expression was associated with increased TB progression risk among household contacts (p = 2.2 × 10⁻4 and p = 0.03). In vitro, aspirin reduced TNFAIP6 expression in BCG-stimulated monocytes.
Conclusion:
These findings suggest that aspirin may reduce PTB risk and implicate TNFAIP6 and NEU1 as potential mediators, supporting aspirin as a candidate adjunctive therapeutic strategy for PTB.
Insights
Aspirin use may reduce the risk of pulmonary tuberculosis (PTB). This study implicates TNFAIP6 and NEU1 genes as potential mediators, suggesting aspirin as an adjunctive therapy for PTB.
Area of Science:
- Genetics
- Pharmacology
- Infectious Diseases
Background:
- Pulmonary tuberculosis (PTB) presents suboptimal treatment outcomes in some patients.
- The potential protective effect of aspirin against PTB and its mechanisms are not well understood.
Purpose of the Study:
- To investigate the association between aspirin use and PTB risk.
- To explore the underlying genetic mechanisms, focusing on TNFAIP6 and NEU1 gene expression.
Main Methods:
- Two-sample Mendelian randomization (MR) to assess aspirin use and PTB risk.
- Summary-data-based Mendelian randomization (SMR) to analyze aspirin target genes.
- Transcriptomic and Kaplan-Meier analyses to evaluate gene expression and TB progression.
- In vitro experiments in monocytes to confirm aspirin's effect on gene expression.
Main Results:
- MR analysis indicated aspirin use was associated with reduced PTB risk (OR=0.06, p=0.01).
- SMR identified TNFAIP6 and NEU1 as significantly associated with PTB.
- Higher TNFAIP6 and NEU1 expression correlated with increased TB progression in household contacts.
- Aspirin reduced TNFAIP6 expression in BCG-stimulated monocytes in vitro.
Conclusions:
- Aspirin may reduce PTB risk, with TNFAIP6 and NEU1 as potential mediating factors.
- These findings support aspirin as a candidate adjunctive therapeutic strategy for PTB.
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