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Updated: Jun 28, 2026

Rapid and Specific Detection of Acinetobacter baumannii Infections Using a Recombinase Polymerase Amplification/Cas12a-based System
Published on: April 25, 2025
Multicenter outbreak of plasmid-encoded blaOXA-72 Acinetobacter baumannii in southern Poland
T Kasperski1, R Arazo Del Pino2,3, K Xanthopoulou2,3
1Department of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Krakow, Poland.
Abstract:
Carbapenem-resistant Acinetobacter baumannii (CRAb) causes hard-to-control healthcare outbreaks, but the mobile resistance determinants that sustain regional spread are often underrecognized. We characterized 70 CRAb isolates from 11 hospitals in southern Poland (2019-2022) using whole-genome sequencing and core genome multilocus sequence typing (cgMLST), with reconstruction of carbapenemase context and plasmid structure. All isolates belonged to international clone 2 (IC2; ST2, Pasteur scheme) or to ST425 (n = 47), ST195 (n = 19), ST208 (n = 2), and ST348 (n = 1) according to the Oxford scheme. In silico KL/OCL typing further differentiated the collection. All isolates were OCL18, whereas the K-locus distribution was dominated by KL125 (n = 48) and KL3 (n = 19), with two KL2 isolates and one KL9 isolate. blaOXA-72 was detected in 50/70 isolates (71.4%), indicating an atypically high regional dominance. The OXA-72-encoding gene was carried on the same ~10.9 kb GR2/repAci1 plasmid (p398AB) in all isolates, which was sequence-identical across centers and contained two oppositely oriented copies of blaOXA-72. Transformation of p398AB into susceptible A. baumannii ATCC17978 conferred a carbapenem-resistant phenotype. cgMLST identified a large multicenter cluster of blaOXA-72-positive isolates spanning multiple cities and hospitals, supporting inter-facility dissemination of a successful IC2 lineage, together with a conserved resistance plasmid. The strict conservation of p398AB during regional spread provides a practical target for rapid molecular screening in outbreak investigations. In contrast, blaOXA-23 and a novel blaOXA-23-like variant (blaOXA-1223) were confined to a minority of isolates. Overall, these data highlight an unusual dominance of plasmid-encoded blaOXA-72 in a multicenter IC2 outbreak and underscore the need for surveillance integrating clonal relatedness with tracking of transferable resistance plasmids.
Insights
Carbapenem-resistant Acinetobacter baumannii (CRAb) outbreaks are driven by the OXA-72 carbapenemase gene on a conserved plasmid (p398AB) within a successful international clone 2 lineage. This finding aids in developing rapid molecular screening tools for outbreak investigations.
Area of Science:
- Medical Microbiology
- Genomics
- Epidemiology
Background:
- Carbapenem-resistant Acinetobacter baumannii (CRAb) poses a significant threat in healthcare settings due to its resistance to last-resort antibiotics.
- The mobile genetic elements and specific lineages driving CRAb outbreaks are often not fully understood, hindering effective control strategies.
Purpose of the Study:
- To investigate the molecular epidemiology and resistance mechanisms of CRAb isolates from multiple hospitals in southern Poland.
- To identify the specific carbapenemase genes, their genetic context (plasmids), and the clonal lineages involved in regional CRAb spread.
Main Methods:
- Whole-genome sequencing (WGS) and core genome multilocus sequence typing (cgMLST) were employed to characterize 70 CRAb isolates.
- Plasmid reconstruction and in silico KL/OCL typing were performed to analyze resistance determinants and their mobile elements.
- Transformation experiments were conducted to confirm the carbapenem resistance phenotype conferred by the identified plasmid.
Main Results:
- All isolates belonged to international clone 2 (IC2) or other known sequence types (STs).
- The blaOXA-72 gene was highly prevalent (71.4%), located on a conserved ~10.9 kb plasmid (p398AB) with two copies of the gene.
- cgMLST revealed a large multicenter cluster of blaOXA-72-positive isolates, indicating dissemination of a successful IC2 lineage and the p398AB plasmid across multiple hospitals.
Conclusions:
- The study highlights the unusual dominance of plasmid-encoded blaOXA-72 within a multicenter IC2 outbreak in southern Poland.
- The conserved p398AB plasmid represents a practical target for rapid molecular screening in CRAb outbreak investigations.
- Effective surveillance requires integrating analyses of clonal relatedness with the tracking of transferable resistance plasmids.
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