Siphoviridae phage tails co-enrich with ex vivo amyloids
Jan-Hannes Schäfer1,2, Robert T O'Neill2, Danielle Grotjahn1
1Department of Integrative Structural and Computational Biology, Scripps Research; La Jolla, CA, USA.
Abstract:
Bacteriophages are ubiquitous in the environment and are part of the natural human microbiome. Despite their abundance, the role of the human phagome in health and disease remains poorly understood. Here, we identify phage tails in ex vivo amyloid extracts from patients with lysozyme amyloidosis (ALys) and light-chain amyloidosis (AL). Using cryo-EM analysis of the ALys dataset, automated model building, and database searches, we assigned the observed tubular assemblies to a phage tail tube protein (TTP). Although we cannot fully rule out the possibility of contamination, the presence of phage tails raises the question of whether they bind to and are co-purified with amyloid fibrils. These structures may provide further insight into the potential relationship between phage-derived assemblies and amyloid remodeling, with possible implications for future therapeutic strategies in human amyloidosis.
Insights
Researchers found phage tails in amyloid extracts from patients with amyloidosis. This discovery suggests a potential link between bacteriophages and amyloid remodeling, opening avenues for new therapeutic strategies.
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- Bacteriophages are abundant in the human microbiome, but their role in health and disease is unclear.
- The human phagome, encompassing all viruses infecting bacteria in the human body, is largely uncharacterized.
- Amyloidosis involves the misfolding and aggregation of proteins into amyloid fibrils, leading to various diseases.
Purpose of the Study:
- To investigate the presence and potential role of bacteriophages in human amyloidosis.
- To explore the structural relationship between phage-derived components and amyloid fibrils.
Main Methods:
- Cryo-electron microscopy (cryo-EM) analysis of ex vivo amyloid extracts.
- Automated model building and database searches for structural identification.
- Analysis of amyloid extracts from patients with lysozyme amyloidosis (ALys) and light-chain amyloidosis (AL).
Main Results:
- Phage tails, specifically phage tail tube protein (TTP) assemblies, were identified in amyloid extracts.
- The presence of phage tails suggests they may bind to or be co-purified with amyloid fibrils.
- While contamination cannot be entirely excluded, the findings point to a potential interaction.
Conclusions:
- Bacteriophage components may be associated with human amyloidosis.
- Phage-derived assemblies could play a role in amyloid remodeling.
- These findings may inform the development of novel therapeutic strategies for amyloidosis.
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