Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Kidney Transplant II: Surgical Procedure01:26

Kidney Transplant II: Surgical Procedure

Preoperative ManagementThe primary goals of preoperative management in kidney transplantation are to optimize the patient’s metabolic state and prepare them for surgery through diet adjustments, necessary dialysis, and tailored medical treatment. This phase also involves comprehensive infection screening and patient education about the surgical procedure and postoperative care to improve outcomes and adherence.Medical ManagementA comprehensive evaluation is required for both the living donor...
Imaging Studies III: Computed Tomography01:27

Imaging Studies III: Computed Tomography

DefinitionComputed Tomography (CT) of the genitourinary (GU) tract is a non-invasive imaging modality that utilizes X-rays and computer processing to generate detailed cross-sectional images of the urinary system, encompassing the kidneys, ureters, bladder, and adjacent structures such as the adrenal glands.PurposeCT scans of the GU tract serve several diagnostic and therapeutic purposes, including:Diagnosis of Urinary Tract Diseases: Detects kidney stones, tumors, cysts, and congenital...
Endoscopic Procedures III: Video Capsule Endoscopy01:28

Endoscopic Procedures III: Video Capsule Endoscopy

Capsule endoscopy, or wireless or video capsule endoscopy, is a diagnostic procedure for examining the entire gastrointestinal tract. Patients swallow a capsule about the size of a vitamin tablet. The capsule is equipped with a transmitter, a battery, an LED light source, and a color video camera to capture images throughout the gastrointestinal tract. This procedure is particularly useful for diagnosing conditions such as Crohn's disease, ulcerative colitis, tumors, polyps, ulcers, unexplained...
Imaging Studies VII: Vascular Imaging01:19

Imaging Studies VII: Vascular Imaging

DefinitionRenal angiography, also known as renal arteriography, is an imaging technique used to obtain a comprehensive view of blood flow and the vascular structure of blood vessels in the kidneys and surrounding areas.PurposeRenal angiography detects blood vessel abnormalities in the kidneys, such as aneurysms, stenosis, thrombosis, vascular tumors, and renal artery stenosis. It evaluates kidney function and guides interventional treatments like angioplasty or stent placement.Pre-Procedure...
Urologic Endoscopic Procedure: Cystoscopic Examination01:28

Urologic Endoscopic Procedure: Cystoscopic Examination

Meaning of Cystoscopic Examination:Cystoscopy is an essential diagnostic tool in urology that is used to assess the structure and function of the genitourinary system. It provides a direct view of the urethra, bladder, and, in some cases, the ureteral openings. This procedure helps detect structural abnormalities, infections, cancers, and blockages in the urinary tract. There are two types of cystoscopy:Flexible cystoscopy is commonly performed in outpatient settings due to its less invasive...
Imaging Studies II: Ultrasonography01:24

Imaging Studies II: Ultrasonography

IntroductionUltrasonography, or renal ultrasound, is a noninvasive medical imaging technique that uses high-frequency sound waves to visualize the kidneys, ureters, bladder, and surrounding tissues.Indications for Urinary System UltrasonographyUrinary system ultrasonography is indicated in various clinical scenarios, such as:Kidney Stones (Urolithiasis): To detect and monitor the size and presence of kidney or urinary tract stones.Hydronephrosis: To assess the dilation of the renal pelvis and...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Endo-SemiS: Towards Robust Semi-Supervised Image Segmentation for Endoscopic Video.

Proceedings of machine learning research·2026
Same authorSame journal

AVA: Automated Viewability Analysis for Ureteroscopic Intrarenal Surgery.

Proceedings of SPIE--the International Society for Optical Engineering·2026
Same author

A multifactorial investigation of 90-day readmission risk in thoracolumbar burst fractures: Does surgery play a role?

North American Spine Society journal·2026
Same author

Rise of Big Data in Spine Surgery Research: A Bibliometric Analysis, 1993-2024.

Cureus·2026
Same author

Endoscopic and intrathecal management of intraventricular fungal infections: a case report of Cladophialophora bantiana and systematic review.

BMC infectious diseases·2026
Same author

A computer vision model for automated kidney stone segmentation and evaluation of its performance vs surgeons.

BJU international·2025
Same journal

Deep learning‑based cell type prediction in lung tissue from brightfield histology using CODEX-derived labels.

Proceedings of SPIE--the International Society for Optical Engineering·2026
Same journal

Reconstructing physiological signals from fMRI across the adult lifespan.

Proceedings of SPIE--the International Society for Optical Engineering·2026
Same journal

Axially Swept Light-Sheet Microscopy using scattering and fluorescence contrast mechanisms.

Proceedings of SPIE--the International Society for Optical Engineering·2026
Same journal

Analytic Bounds on GAMLSS Model Variability of Normative White Matter Brain Charts.

Proceedings of SPIE--the International Society for Optical Engineering·2026
Same journal

Personalized White Matter Bundle Segmentation for Early Childhood.

Proceedings of SPIE--the International Society for Optical Engineering·2026
See all related articles

Related Experiment Video

Updated: Jun 30, 2026

Point-of-Care Kidney and Genitourinary Ultrasound in Adults: Image Acquisition
03:19

Point-of-Care Kidney and Genitourinary Ultrasound in Adults: Image Acquisition

Published on: June 21, 2024

Kidney Endoscopy Video to Preoperative CT Alignment for Depth Estimation.

Daiwei Lu1, Hao Li1, Clifford Pierre2

  • 1Dept. of Computer Science, Vanderbilt University, Nashville, TN, USA.

Proceedings of Spie--The International Society for Optical Engineering
|June 29, 2026
PubMed
Summary
This summary is machine-generated.

Generating ground truth depth for kidney endoscopy training is challenging. This study introduces a novel pipeline using 3D reconstruction and CT registration to create synthetic data, achieving sub-millimeter accuracy.

Keywords:
EndoscopyReconstructionRegistrationSimulationVideo alignment

More Related Videos

Use of 3D Robotic Ultrasound for In Vivo Analysis of Mouse Kidneys
08:21

Use of 3D Robotic Ultrasound for In Vivo Analysis of Mouse Kidneys

Published on: August 12, 2021

In Vivo, Percutaneous, Needle Based, Optical Coherence Tomography of Renal Masses
09:31

In Vivo, Percutaneous, Needle Based, Optical Coherence Tomography of Renal Masses

Published on: March 30, 2015

Related Experiment Videos

Last Updated: Jun 30, 2026

Point-of-Care Kidney and Genitourinary Ultrasound in Adults: Image Acquisition
03:19

Point-of-Care Kidney and Genitourinary Ultrasound in Adults: Image Acquisition

Published on: June 21, 2024

Use of 3D Robotic Ultrasound for In Vivo Analysis of Mouse Kidneys
08:21

Use of 3D Robotic Ultrasound for In Vivo Analysis of Mouse Kidneys

Published on: August 12, 2021

In Vivo, Percutaneous, Needle Based, Optical Coherence Tomography of Renal Masses
09:31

In Vivo, Percutaneous, Needle Based, Optical Coherence Tomography of Renal Masses

Published on: March 30, 2015

Area of Science:

  • Medical Imaging
  • Computer Vision
  • Surgical Robotics

Background:

  • Accurate depth perception is crucial for kidney endoscopy, but obtaining ground truth depth for training neural networks is difficult.
  • Traditional methods like optical tracking are incompatible with kidney endoscopy, hindering direct depth information acquisition.

Purpose of the Study:

  • To develop a robust method for generating accurate ground truth depth information for kidney endoscopy.
  • To enable effective training of neural networks for monocular depth estimation in this surgical context.

Main Methods:

  • A pipeline was developed to reconstruct a 3D point cloud from endoscopy videos.
  • This point cloud was registered to a segmentation derived from preoperative CT scans.
  • Synthetic endoscopy frames with precise depth information were generated using estimated camera poses and CT surface geometry.

Main Results:

  • The method achieved sub-millimeter Root Mean Square Error (RMSE) accuracy on kidney phantoms (0.61 ± 0.08 mm).
  • Validation on real patient data demonstrated comparable accuracy (0.86 mm).

Conclusions:

  • The proposed pipeline effectively generates accurate ground truth depth for kidney endoscopy.
  • This approach overcomes limitations of real-time tracking and facilitates neural network training for improved surgical visualization.