Related Experiment Video
Updated: Jul 2, 2026

Isolation and Transcriptome Analysis of Plant Cell Types
Published on: April 7, 2023
Stable lineages, rewired landscapes: single-cell and spatial multi-omics reveal developmental plasticity under
Ying-Lan Chen1, Jia Wei2, Ching-Wei Lu3
1Program in Specialty Crops and Metabolomics, Academy of Circular Economy, National Chung Hsing University, Nantou, 540001, Taiwan.
Abstract:
Plants are constantly challenged by environmental stressors, yet their sessile nature demands highly flexible developmental programs to maintain growth and survival. With the advent of single-cell technologies, developmental plasticity can now be dissected at cellular resolution. Two recent Populus studies show that both mechanical and drought stress induce xylem remodeling by shifting cell-type ratios or altering differentiation speed, while preserving the underlying developmental lineages. Highly similar patterns have been recently observed in Arabidopsis and cabbage, in which osmotic and salt stress alter the tempo of root hair differentiation without changing lineage identity. The recurrence of this developmental program across woody and herbaceous species, spanning distinct taxonomic orders, suggests that lineage-stable yet flexible stress responses are evolutionarily conserved in plants. Moreover, these insights were enabled by the application of advanced single-cell and spatially resolved approaches, with several of these studies incorporating single-cell/nucleus transcriptomics with spatial multi-omics analyses to link developmental dynamics with tissue context. This balance between flexibility and developmental order may represent a fundamental principle by which plants maintain resilience under diverse environmental challenges and may offer a valid framework for this field of study.
Related Concept Videos
Responses to Salt Stress
Multipotency and Niche of Bulge Stem Cell
Meristems and Plant Growth
Lineage Commitment
Evolution of New Traits in Microbes
Transcription
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
