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AI-Assisted Clinical Data Abstraction From Electronic Health Records: Retrospective Concordance Study.
Camille Sarah Schwartz1, Michael John Anderson2, Kelsey Nicole Moakler2
1University of Nevada, Reno, 1664 N Virginia St, Reno, NV, 89557, United States, 1 7027529240.
JMIR Formative Research
|July 7, 2026
Summary
Artificial intelligence (AI) significantly improves the efficiency and accuracy of extracting patient-reported outcomes from electronic health records. This AI-assisted approach reduced data abstraction time by over 90% with high concordance to human review.
Area of Science:
- Medical Informatics
- Artificial Intelligence in Healthcare
- Clinical Outcomes Research
Background:
- Manual chart abstraction from electronic health records (EHRs) is crucial but time-consuming and error-prone.
- Artificial intelligence (AI), especially large language models, offers potential for automating data extraction from clinical notes.
- AI can improve efficiency and consistency in obtaining structured data from unstructured clinical documentation.
Purpose of the Study:
- To evaluate the accuracy and efficiency of an AI-assisted method for extracting patient-reported outcomes from clinical notes.
- To compare AI-assisted abstraction with traditional manual abstraction by human reviewers.
Main Methods:
- A retrospective study involving 26 patients treated with low-dose radiation therapy for osteoarthritis.
- Human reviewers abstracted Numeric Rating Scale (NRS) pain scores and von Pannewitz Score (VPS) improvement.
- A HIPAA-compliant generative pretrained transformer AI system extracted the same data points; concordance and time were assessed.
Main Results:
- The AI system showed high concordance with human abstraction: 92% exact match for NRS (ICC=0.96) and 94% for VPS (κ=0.91).
- AI abstraction reduced average patient abstraction time from ~30 minutes to 2 minutes (>90% time savings).
- The AI identified one clinically relevant data point missed by manual review; no spurious values were generated.
Conclusions:
- AI-assisted data abstraction demonstrates high concordance with human review and significantly reduces time requirements.
- Findings support the feasibility of AI-assisted abstraction workflows in clinical research.
- Further validation across larger, diverse datasets is necessary to confirm generalizability.
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