Related Experiment Video
Updated: Jul 9, 2026

14:44
Structure and Coordination Determination of Peptide-metal Complexes Using 1D and 2D 1H NMR
Published on: December 16, 2013
Protein-Enforced Ligand Environments Reshape Classical Coordination Preferences in Copper Polypyridyl Complexes
Inseo Choi1, Jaehee Lee1, Kyohyun Hwang1
1Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea.
Journal of the American Chemical Society
|July 8, 2026
Summary
Researchers engineered protein scaffolds to control copper
Area of Science:
- Bioinorganic Chemistry
- Protein Engineering
- Coordination Chemistry
Background:
- Copper coordination chemistry exhibits Jahn-Teller distortion in Cu(II) and limited high-coordinate Cu(I) species.
- Intrinsic electronic and structural preferences of copper limit coordination environments.
Purpose of the Study:
- To demonstrate protein scaffolds as mechanically active ligands overriding intrinsic copper preferences.
- To create novel mononuclear copper sites within engineered protein environments.
Main Methods:
- Designed four protein scaffolds with preorganized bipyridine-alanine noncanonical amino acids.
- Generated mononuclear copper sites in both cupric (Cu(II)) and cuprous (Cu(I)) states within protein scaffolds.
Main Results:
- Achieved distinct charge-transfer features and enhanced structural symmetry.
- Significantly reduced Jahn-Teller distortion and observed unprecedented octahedral Cu(I) geometry.
- Reported cathodic shifts in redox potentials and rapid self-exchange rates, indicating entatic-state behavior.
Conclusions:
- Protein scaffolds serve as effective multidentate ligands for nonclassical coordination environments.
- Protein-imposed strains expand the chemical space and reactivity of metalloproteins.
- This strategy offers a general approach to designing novel metalloprotein active sites.
Related Concept Videos
Metal-Ligand Bonds
The hemoglobin in the blood, the chlorophyll in green plants, vitamin B-12, and the catalyst used in the manufacture of polyethylene all contain coordination compounds. Ions of the metals, especially the transition metals, are likely to form complexes.
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
Coordination Number and Geometry
For transition metal complexes, the coordination number determines the geometry around the central metal ion. Table 1 compares coordination numbers to molecular geometry. The most common structures of the complexes in coordination compounds are octahedral, tetrahedral, and square planar.
Valence Bond Theory
Coordination compounds and complexes exhibit different colors, geometries, and magnetic behavior, depending on the metal atom/ion and ligands from which they are composed. In an attempt to explain the bonding and structure of coordination complexes, Linus Pauling proposed the valence bond theory, or VBT, using the concepts of hybridization and the overlapping of the atomic orbitals. According to VBT, the central metal atom or ion (Lewis acid) hybridizes to provide empty orbitals of suitable...
Complexation Equilibria: The Chelate Effect
In complexation reactions, metal atoms or cations interact with ligands to form donor-acceptor adducts called metal complexes. Ligands that bind through one donor site are monodentate, ligands with two donor sites are bidentate, and those with more than two donor sites are polydentate ligands. For example, ethylene diamine is a bidentate ligand that binds through two nitrogen donor atoms, forming a five-membered ring. EDTA is a polydentate ligand that binds through four oxygen and two nitrogen...
Crystal Field Theory - Octahedral Complexes
Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
Colors and Magnetism
Color in Coordination Complexes
When atoms or molecules absorb light at the proper frequency, their electrons are excited to higher-energy orbitals. For many main group atoms and molecules, the absorbed photons are in the ultraviolet range of the electromagnetic spectrum, which cannot be detected by the human eye. For coordination compounds, the energy difference between the d orbitals often allows photons in the visible range to be absorbed and emitted, which is seen as colors by the human eye.
When atoms or molecules absorb light at the proper frequency, their electrons are excited to higher-energy orbitals. For many main group atoms and molecules, the absorbed photons are in the ultraviolet range of the electromagnetic spectrum, which cannot be detected by the human eye. For coordination compounds, the energy difference between the d orbitals often allows photons in the visible range to be absorbed and emitted, which is seen as colors by the human eye.

