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A Radiomics-Driven Model to Distinguish Between Clinically Similar Myxopapillary Ependymomas and Lumbosacral
Adhith Palla1, Nicolas K Goff1,2, Blake Perdikis1
1Department of Neurological Surgery, NYU Langone Health, New York, New York, USA.
Background And Objectives:
Myxopapillary ependymomas (MPE) and intradural lumbosacral schwannomas may be challenging to distinguish based on presenting characteristics and preoperative imaging. Accurate differentiation is crucial, as MPEs carry a risk of cerebrospinal fluid dissemination and warrant earlier intervention, a more tailored surgical strategy, consideration for adjuvant radiation, and frequent surveillance. Here, we describe our institutional experience with these tumors and develop a radiomics-based machine learning model to help distinguish them on preoperative imaging.
Methods:
Institutional surgical records from 2011 to 2025 were queried and clinical data were extracted for the retrospective cohort analysis. Tumors were manually segmented in ITK-Snap from T1 postcontrast images, and radiomics features were extracted using the PyRadiomics package. An ensemble of random forest, k-nearest neighbors, and naive Bayes classifiers was trained on a subset of radiomics features using nested cross-validation.
Results:
Our cohort included 101 cases, including 32 MPEs, 61 intradural schwannomas, and 8 dumbbell schwannomas with a circumscribed intradural component. Twenty-four consecutive tumors (3 MPEs and 21 schwannomas) were used as a held-out pseudoprospective test set. No significant difference in presenting International Standards for Neurological Classification of Spinal Cord Injury grade was observed (P = .558). Our radiomics model incorporated segmentations with inter-rater DICE scores >0.83 for all tumors. Cross-validation (area under the receiver operating characteristic = 0.895) and test (area under the receiver operating characteristic = 0.984) discriminatory performance was high and identified biologically relevant features, such as maximum 3-dimensional diameter, that were significantly increased (P < .001) in MPEs, likely due to longitudinal tumor growth along the filum. Excluding scoliotic patients did not significantly alter discrimination, suggesting robustness to vertebral column malalignment that may coexist with intradural tumors.
Conclusion:
A radiomics-based machine learning model demonstrated excellent discriminative ability between MPE and lumbosacral schwannoma, achieving high accuracy and robustness to vertebral alignment variations. These results suggest that radiomics-based models may be developed into a useful tool for preoperative planning and patient counseling.
Insights
A new machine learning model accurately distinguishes myxopapillary ependymomas (MPE) from lumbosacral schwannomas using radiomics. This tool aids in preoperative planning for spinal tumors, improving patient care.
Area of Science:
- Neurosurgery
- Radiology
- Machine Learning
Background:
- Myxopapillary ependymomas (MPE) and intradural lumbosacral schwannomas present similar imaging characteristics.
- Accurate differentiation is critical due to MPEs' risk of cerebrospinal fluid dissemination and need for tailored management.
Purpose of the Study:
- To develop a radiomics-based machine learning model for distinguishing MPEs from lumbosacral schwannomas on preoperative imaging.
- To assess the model's accuracy and robustness in differentiating these spinal tumors.
Main Methods:
- Retrospective analysis of 101 spinal tumor cases (32 MPEs, 61 intradural schwannomas, 8 dumbbell schwannomas).
- Manual tumor segmentation from T1 postcontrast MRI and radiomics feature extraction using PyRadiomics.
- Ensemble machine learning classifiers (random forest, k-nearest neighbors, naive Bayes) trained with nested cross-validation.
Main Results:
- The radiomics model achieved high discriminatory performance: area under the ROC curve of 0.895 (cross-validation) and 0.984 (test set).
- Identified features like maximum 3D diameter, significantly larger in MPEs, likely due to longitudinal growth.
- Model demonstrated robustness to vertebral column malalignment.
Conclusions:
- A radiomics-based machine learning model shows excellent ability to differentiate MPE from lumbosacral schwannoma.
- The model's accuracy and robustness suggest its potential as a valuable tool for preoperative spinal tumor planning and patient counseling.