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Updated: Jul 15, 2026

Untargeted Metabolomics from Biological Sources Using Ultraperformance Liquid Chromatography-High Resolution Mass Spectrometry (UPLC-HRMS)
Published on: May 20, 2013
Comparative evaluation of native and fluorinated amino acid probes in stereoselective plasma profiling: A
Yutaka Konya1, Kosuke Fukuda2, Naohisa Umeya2
1Pharmaceuticals and Life Sciences Division, Shimadzu Techno-Research, Inc., 1 Nishinokyo-Shimoaicho, Nakagyo-ku, Kyoto 604-8436, Japan.
Abstract:
Stereoselective plasma profiling of amino acid enantiomers has been proposed as a useful approach for investigating organ-specific transport processes. However, probe-dependent metabolic and/or distributional perturbations may affect the interpretation of stereoselective plasma concentration profiles. Therefore, we compared the plasma concentration profiles of a non-native trifluoromethylated alanine analog (DL-Ala-F3) with those of two deuterium-labeled native amino acids, alanine (DL-Ala-d3) and serine (DL-Ser-d3). The three probes were intravenously co-administered to rats (20 mg/kg each, n = 3). Enantiomer-specific quantification was performed using a validated crown ether-based chiral liquid chromatography-tandem mass spectrometry (LC-MS/MS) method, which approach demonstrated adequate separation (resolution, Rs ≥ 2.52), linearity (r2 > 0.995). DL-Ala-d3 and DL-Ser-d3 exhibited pronounced enantiomeric imbalance at 5 min post-dose, with D/L ratios of 10.1 and 7.0, respectively, reflecting substantially lower plasma concentrations and more rapid disappearance of the L-enantiomers. In contrast, DL-Ala-F₃ showed nearly identical D- and L-enantiomer concentrations at 5 min post-dose (D/L = 1.0), indicating preservation of the initial enantiomeric balance. Thereafter, stereoselective elimination became evident, with D-Ala-F3 disappearing faster than L-Ala-F3 but more slowly than the D-enantiomers of the deuterium-labeled probes. Although the mechanisms underlying these differences remain unclear, the plasma concentration profiles of non-native DL-Ala-F3 appeared less susceptible to probe-dependent metabolic and/or distributional perturbations than those of the deuterium-labeled native probes. This proof-of-concept study highlights the importance of probe selection in minimizing potential bias when investigating enantiomer-dependent organ-specific transport processes.
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