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Updated: Aug 6, 2026

Oncogenic Gene Fusion Detection Using Anchored Multiplex Polymerase Chain Reaction Followed by Next Generation Sequencing
Published on: July 5, 2019
Targeting Oncogenic Gene Fusions in Lung Cancer
Yunan Nie1, Frederick H Wilson1,2,3
1Department of Internal Medicine, Section of Medical Oncology.
Abstract:
Oncogenic gene fusions define a clinically important subset of non-small cell lung carcinoma (NSCLC) for which targeted therapies have transformed outcomes. Over the past 15 years, successive generations of tyrosine kinase inhibitors (and more recently, monoclonal antibodies) have demonstrated substantial improvements in response rates, progression-free survival, and central nervous system control across multiple fusion-defined populations. This review consolidates current evidence for FDA-approved therapies targeting ALK, ROS1, RET, NTRK, and NRG1 fusions in lung cancer, highlighting mechanisms of action, pivotal clinical trials, resistance patterns, and toxicity profiles. We also discuss advances in molecular diagnostics (including the growing role of RNA-based sequencing) and emerging strategies in the adjuvant and perioperative settings. Finally, we outline ongoing clinical trials and future directions aimed at overcoming resistance and expanding precision oncology approaches for patients with rare fusion-driven lung cancers.
Insights
Targeted therapies for non-small cell lung cancer (NSCLC) with gene fusions have improved patient outcomes. This review covers FDA-approved treatments for ALK, ROS1, RET, NTRK, and NRG1 fusions, resistance, and future directions.
Area of Science:
- Oncology
- Genetics
- Pharmacology
Background:
- Oncogenic gene fusions are key drivers in a significant subset of non-small cell lung cancer (NSCLC).
- Targeted therapies, including tyrosine kinase inhibitors and monoclonal antibodies, have revolutionized NSCLC treatment outcomes.
- FDA-approved therapies demonstrate substantial improvements in response rates, progression-free survival, and CNS control for fusion-defined NSCLC populations.
Purpose of the Study:
- To review current evidence for FDA-approved therapies targeting specific gene fusions in lung cancer.
- To highlight mechanisms of action, clinical trials, resistance patterns, and toxicity profiles of these targeted therapies.
- To discuss advances in molecular diagnostics and emerging strategies in adjuvant and perioperative settings for fusion-driven NSCLC.
Main Methods:
- Consolidation of current evidence from pivotal clinical trials.
- Review of FDA-approved therapies targeting ALK, ROS1, RET, NTRK, and NRG1 fusions.
- Discussion of molecular diagnostic advances, including RNA-based sequencing.
Main Results:
- Targeted therapies have significantly improved outcomes in NSCLC patients with specific gene fusions.
- Understanding resistance patterns and toxicity profiles is crucial for optimizing treatment.
- Advances in diagnostics and emerging strategies are expanding precision oncology for rare fusion-driven lung cancers.
Conclusions:
- Targeted therapies targeting ALK, ROS1, RET, NTRK, and NRG1 fusions represent a major advance in NSCLC treatment.
- Ongoing research focuses on overcoming resistance mechanisms and expanding precision oncology.
- RNA-based sequencing and novel therapeutic strategies are critical for future progress in rare fusion-driven lung cancers.
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