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Updated: Aug 5, 2026

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Oral Mycobiome: Composition, Functionality and Clinical Implication
Geovani Moreira da Cruz1, Amanda Siqueira Fraga1, Maíra Terra Garcia1
1Department of Biosciences and Oral Diagnosis, Institute of Science and Technology, São Paulo State University (UNESP), São José dos Campos 12245-000, SP, Brazil.
The oral mycobiome, dominated by Candida, plays a role in oral health and disease. Understanding its composition aids in early disease detection and treatment development.
Area of Science:
- Microbiology
- Oral Health
- Mycology
Background:
- Historically, studying oral fungi was difficult due to cultivation limitations.
- Metagenomic advancements have revolutionized the understanding of the oral mycobiome.
- The oral mycobiome comprises diverse fungal species influencing oral health.
Purpose of the Study:
- To review the scientific literature on oral mycobiome composition and dynamics.
- To analyze the oral mycobiome's impact on local pathological conditions.
- To explore the role of specific fungi in oral diseases.
Main Methods:
- Narrative review of existing scientific evidence.
- Analysis of studies utilizing metagenomic techniques for fungal identification.
- Synthesis of data on fungal species prevalence in health and disease.
Main Results:
- The oral mycobiome is diverse, with *Candida* being prominent, followed by *Cladosporium*, *Aureobasidium*, and *Saccharomyces*.
- *Candida albicans* is common in health and disease, but other *Candida* species and fungi like *Pichia kudriavzevii* are linked to oral candidiasis.
- *C. albicans* and *C. dubliniensis* associate with advanced dental caries, while *Debaryomyces* and *Rhodotorula* may offer protection against *Streptococcus mutans*.
- Increased yeast-bacteria interactions are noted in periodontitis, and *C. albicans* is implicated in oral carcinogenesis.
Conclusions:
- A comprehensive understanding of the oral mycobiome is crucial.
- This knowledge can facilitate early detection of oral diseases.
- It can also guide the development of novel therapeutic strategies targeting the oral mycobiome.
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