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Error-Guaranteed Compression with Preservation of Downstream Quantities for Electron MicroscopyȠ
Jaemoon Lee1, Eric R Hoglund2, Qian Gong1
1Computer Science and Mathematics Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, TN 37830, USA.
New compression methods for 4D Scanning Transmission Electron Microscopy (4D STEM) data preserve essential features. This approach reduces errors in downstream analyses, making massive microscopy datasets more manageable.
Area of Science:
- Materials Science
- Data Science
- Microscopy
Background:
- 4D Scanning Transmission Electron Microscopy (4D STEM) generates massive datasets, exceeding storage and bandwidth capabilities.
- Existing compression methods (lossless and lossy) have limitations in ratio or data integrity.
- Accurate downstream analysis of 4D STEM data is crucial for scientific discovery.
Purpose of the Study:
- To develop a compression method for 4D STEM data that preserves essential features and statistical moments.
- To define a metric for evaluating compression accuracy in diffraction space.
- To enable consistent recovery of moment-derived observables from compressed data.
Main Methods:
- A moment-preserving compression workflow combining multigrid adaptive reduction (MGARD) and constraint satisfaction.
- MGARD provides mathematically guaranteed error bounds on raw data.
- Constraint satisfaction rectifies decompressed data to preserve statistical moments (e.g., Center-of-Mass).
Main Results:
- The proposed method significantly reduces errors in targeted downstream quantities.
- Moment-derived observables are recovered consistently from the corrected tensor.
- A frequency-domain reliability criterion helps evaluate acceptable accuracy limits.
Conclusions:
- The moment-preserving compression workflow offers a practical solution for managing large 4D STEM datasets.
- This approach ensures data integrity for critical downstream microscopy analyses.
- Enables efficient storage and analysis of terabyte-scale 4D STEM data.
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