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Updated: Aug 5, 2026

Lysosomal Profiling With LysoTracker For Quantitative Assessment of Cellular Senescence In Human Fibroblasts
Published on: July 17, 2026
Lysosomal Profiling With LysoTracker For Quantitative Assessment of Cellular Senescence In Human Fibroblasts
Javier Estrada Toro1, Scott A Tenenbaum2, Melinda Larsen3
1Department of Nanoscale Science and Engineering, University at Albany, State University of New York; jestrada3@albany.edu.
Cellular senescence involves lysosomal remodeling. A new live-cell imaging method uses LysoTracker Deep Red to quantify changes in acidic organelles, offering a simple readout for senescence burden.
Area of Science:
- Cell Biology
- Molecular Biology
- Aging Research
Background:
- Cellular senescence is a state of stable cell-cycle arrest.
- Senescent cells display characteristic phenotypes, including enlarged morphology and altered secretory signaling.
- Lysosomal remodeling, particularly the expansion of the acidic endo-lysosomal compartment, is a hallmark of senescence.
Purpose of the Study:
- To describe a live-cell imaging protocol for quantifying senescence-linked lysosomal remodeling.
- To provide a pH-dependent proxy for the acidic organelle compartment as a correlate of senescence burden.
- To offer a practical, quantitative complement to conventional senescence assays.
Main Methods:
- Utilized LysoTracker Deep Red, an acidotropic fluorescent dye, for live-cell imaging.
- Demonstrated the protocol in IMR-90 human lung fibroblasts undergoing replicative senescence.
- Detailed cell culture, LysoTracker staining, fluorescence imaging, and image-based quantification of lysosomal signal intensity and area per cell.
Main Results:
- Observed higher acidotropic fluorescent dye signal and larger lyso-positive regions in late-passage senescent cells compared to early-passage controls.
- Results are consistent with the expansion of the acidic organelle compartment during senescence.
- The readout serves as an indirect correlate of lysosomal remodeling.
Conclusions:
- The described protocol offers a simple, quantitative method for assessing senescence burden via lysosomal remodeling.
- The method is adaptable to other cell types and senescence-inducing stresses.
- This approach complements traditional senescence detection methods like SA-β-Gal staining.
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