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Updated: Aug 11, 2026

Basic Three-Dimensional (3D) Intestinal Model System with an Immune Component
Published on: September 1, 2023
Protocol for a primary human 2D intestinal epithelium-dendritic cell co-culture organoid model to study mucosal
Anusca Germaine Rader1, Carla Mónica Sampaio Ribeiro1
1Amsterdam UMC location University of Amsterdam, Center for Infection and Molecular Medicine, Amsterdam, the Netherlands; Amsterdam institute for Immunology & Infectious Diseases, Amsterdam, the Netherlands; Amsterdam Gastroenterology Endocrinology and Metabolism, Amsterdam, the Netherlands.
Abstract:
The intestinal mucosa is a major HIV-1 infection site, making immune-augmented intestinal models essential for mechanistic and therapeutic studies. We present a protocol that converts human intestinal organoids into polarized 2D epithelial monolayers and incorporates basolateral dendritic cells to create a biomimetic intestinal mucosal model. We describe steps for monolayer formation, integrity assessment, immune cell co-culture, virus inoculation, and analyses by flow cytometry and confocal microscopy. This immuno-organoid platform enables controlled HIV-1 exposure with immunological and virological readouts. For complete details on the use and execution of this protocol, please refer to Rader et al.1.

