The deubiquitinase USP4 stabilizes the SCFFBXO24 ubiquitin E3 ligase to regulate immunity in experimental pneumonia
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Updated: Aug 7, 2026

In-vitro Reconstitution of Bacterial Ubiquitination and VCP/p97-mediated Elimination
Published on: January 2, 2026
Ilknur Yurtsever1, Daniela Farkas1, Alex Cornwell1
1Department of Internal Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, Davis Heart and Lung Institute, College of Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA.
Abstract:
The ubiquitin E3 ligase SCFFBXO24 targets key proteins for degradation that regulate important biological processes, but the mechanisms controlling cellular concentrations of its receptor subunit, F-box only protein 24 (FBXO24), remain unknown. Here, Haemophilus influenzae type B (HiB), an important cause of pneumonia, protects FBXO24 from lysosomal degradation in THP-1 macrophage cells by reducing its ubiquitylation levels. We identified that the ubiquitin-specific peptidase 4 (USP4) mediates FBXO24 deubiquitylation and stabilization in response to HiB infection in a TLR4 receptor-dependent manner. In experimental HiB pneumonia, either nanoparticle delivery of encapsulated USP4 siRNA or targeted genetic disruption of Fbxo24 in mice led to increased alveolar mononuclear cells coupled with reduced bacterial loads, attenuated pulmonary edema and decreased lung injury severity compared to control mice. Collectively, these findings demonstrate the ability of a bacterial pathogen to exploit a deubiquitylation mechanism to preserve cellular levels of an E3 ligase component, thereby impairing innate host defense responses.
Insights
The bacterium Haemophilus influenzae type B (HiB) protects the F-box only protein 24 (FBXO24) from degradation by reducing its ubiquitylation. This bacterial mechanism impairs innate immune defenses during pneumonia.
Area of Science:
- Cellular Biology
- Immunology
- Microbiology
Background:
- The SCFFBXO24 ubiquitin ligase regulates vital biological processes by targeting proteins for degradation.
- Mechanisms controlling the cellular levels of FBXO24, a key receptor subunit, are not well understood.
Purpose of the Study:
- To investigate how Haemophilus influenzae type B (HiB) affects FBXO24 stability.
- To elucidate the role of deubiquitylation in HiB-mediated immune evasion.
Main Methods:
- Utilized THP-1 macrophage cells and experimental HiB pneumonia models.
- Investigated the deubiquitylation activity of ubiquitin-specific peptidase 4 (USP4).
- Employed nanoparticle delivery of USP4 siRNA and genetic disruption of Fbxo24 in mice.
Main Results:
- HiB infection reduces FBXO24 ubiquitylation and subsequent lysosomal degradation in macrophages.
- USP4 mediates FBXO24 deubiquitylation and stabilization in a Toll-like receptor 4 (TLR4)-dependent manner.
- USP4 inhibition or Fbxo24 disruption in mice reduced bacterial load and lung injury severity.
Conclusions:
- Bacterial pathogens can manipulate host deubiquitylation pathways to stabilize E3 ligase components.
- This bacterial strategy impairs innate host defense mechanisms, contributing to disease pathogenesis.
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