Related Experiment Video
Updated: Aug 21, 2026

Biomarker Identification for Gender Specificity of Alzheimer's Disease Based on the Glial Transcriptome Profiles
Published on: May 20, 2024
SCRIB is a Shared Transcriptomic Biomarker Candidate Linking Cardioembolic Stroke and Alzheimer's Disease
Youdi Chen1, Enjie Song1,2, Susu Yu1,3
1Brain center, Zhejiang Hospital, No. 1229 Gudun Road, Hangzhou, 310030, China.
Insights
This study identified SCRIB as a potential shared biomarker linking cardioembolic stroke (CES) and Alzheimer's disease (AD). Findings suggest a molecular connection between cerebrovascular issues and neurodegeneration.
Area of Science:
- Neuroscience
- Genomics
- Biomarker Discovery
Background:
- Acute ischemic stroke, particularly cardioembolic stroke (CES), is a leading cause of death and disability.
- Post-stroke cognitive impairment and Alzheimer's disease (AD) represent significant clinical challenges.
- Shared molecular mechanisms between vascular cognitive impairment and AD are not well understood.
Purpose of the Study:
- To identify shared molecular signatures and candidate biomarkers linking CES and AD.
- To explore potential transcriptomic links between cerebrovascular pathology and neurodegeneration.
Main Methods:
- Utilized Gene Expression Omnibus datasets for CES and AD.
- Applied differential gene expression analysis (limma) and weighted gene co-expression network analysis (WGCNA).
- Employed machine learning (LASSO, SVM-RFE, random forest) for gene prioritization and ROC analysis for validation.
Main Results:
- Identified seven overlapping genes between CES and AD.
- SCRIB was consistently selected as a candidate biomarker across multiple analyses.
- SCRIB demonstrated diagnostic potential in internal and external validation cohorts, including an atrial fibrillation cohort.
Conclusions:
- SCRIB emerges as a potential shared transcriptomic biomarker candidate linking CES and AD.
- Findings provide preliminary evidence for a molecular link between cerebrovascular disease and neurodegeneration.
- Further mechanistic and clinical studies are warranted to validate SCRIB's role.
Abstract:
Acute ischemic stroke is a major cause of death and disability, and post-stroke cognitive impairment remains a major clinical challenge. Cardioembolic stroke (CES), often associated with atrial fibrillation, is closely linked to cognitive decline. Increasing evidence suggests that vascular dysfunction contributes to both vascular cognitive impairment and Alzheimer's disease (AD), but the shared molecular basis remains unclear. This study aimed to identify shared molecular signatures and candidate biomarkers linking CES and AD. Gene expression datasets were obtained from the Gene Expression Omnibus database. Differentially expressed genes were identified using limma, and disease-related gene modules were constructed using weighted gene co-expression network analysis. Functional enrichment analyses were performed to explore shared pathways. Three machine learning algorithms-LASSO, SVM-RFE, and random forest-were used to prioritize candidate genes. Receiver operating characteristic analysis, nomogram modeling, single-gene gene set enrichment analysis, and external validation were performed to evaluate the potential relevance of the identified gene. Seven overlapping genes were identified between CES and AD. Among them, SCRIB was consistently selected by the integrated feature-selection workflow and showed moderate diagnostic performance in both internal datasets. Supportive validation was observed in an independent AD dataset and in an atrial fibrillation-related surrogate validation cohort. SCRIB may represent a shared transcriptomic biomarker candidate linking CES and AD. These findings provide preliminary transcriptomic evidence for a potential molecular link between cerebrovascular pathology and neurodegeneration, but further mechanistic and clinical validation is required.
