Related Experiment Video
Updated: Sep 3, 2026

Hybrid µCT-FMT imaging and image analysis
Published on: June 4, 2015
Machine-learning-enhanced image reconstruction in optical tomography using the Monte Carlo method for light transport
Jonna Kangasniemi1, Meghdoot Mozumder1, Andreas Hauptmann2,3
1University of Eastern Finland, Department of Technical Physics, Kuopio, Finland.
Significance:
The Monte Carlo method for light transport is widely accepted as an accurate method for simulating light propagation in a scattering medium. Its use in optical tomography, however, suffers from inherent stochastic noise. This noise is present in both evaluations of the forward model, as well as in the search direction of the minimization algorithm used for image reconstruction.
Aim:
We aim to utilize machine learning to compensate for the stochastic Monte Carlo noise in the reconstruction of absorption and scattering in optical tomography.
Approach:
An iterative image reconstruction algorithm is proposed. The algorithm uses convolutional neural networks in a stochastic Gauss-Newton update when estimating absorption and scattering coefficients.
Results:
The methodology is evaluated using numerical simulations and compared against the conventional stochastic Gauss-Newton algorithm in optical tomography. It is demonstrated that the methodology can be used to compensate for image reconstruction artifacts caused by the stochastic noise.
Conclusions:
The proposed machine learning approach can be used to compensate for stochastic noise in Gauss-Newton iterations, and it enables reconstruction of absorption and scattering with a significantly lower number of photons than a conventional stochastic Gauss-Newton algorithm.
Related Concept Videos
Computed Tomography
The technique was invented in the 1970s and is based on the principle that as X-rays pass through the body, they are absorbed or reflected at different levels. In the technique, a patient lies on a motorized platform while a computerized axial tomography (CAT) scanner rotates...
Electron Microscope Tomography and Single-particle Reconstruction
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...

