Modelling the impacts of imports and non-native subspecies hybridisation in honeybees

Human-mediated movement of organisms for agriculture and ecosystem services often results in hybridisation and introgression between populations of native and non-native species. While introgression may increase genetic diversity, it can erode unique adaptations and reduce fitness, threatening the survival of native lineages. Honeybees offer a good model with extensive records, queen trade and migratory beekeeping facilitating genetic exchange among subspecies. To explore these dynamics, we used SIMplyBee to simulate hybridisation between populations of native Apis mellifera mellifera and non-native Apis mellifera carnica. We adopted the parameters from the Irish honeybee population that maintains relatively low levels of import, but is threatened by commercial imports. The model included colony honey yield and fitness as complex polygenic traits. We simulated varying import rates, genetic correlations between fitness in native and non-native environments, and spatial distributions of introgression over 20 years, measuring levels and rate of introgression and genetic means for both traits. Increased imports accelerated introgression and induced a trade-off between higher honey yield and lower fitness, and decreasing genetic correlations between environments amplified fitness decline. Spatial simulations showed the spread of introgression across the entire simulated area. Halting imports reversed the trend, but purging of introgressed material was slow and varied among replicates. These findings highlight the trade-off between short-term production gains and long-term losses in fitness and adaptation. Our modelling framework provides a reference for exploring introgression in other systems, emphasising that sustainable management of introgression requires restricting imports and breeding locally adapted populations rather than relying on non-native imports.