Related Experiment Video
Updated: Sep 20, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Molecular epidemiology of enterotoxigenic Staphylococcus in marine fish from southeast India: public health
Sivaperumal Pitchiah1,2, Kamala Kannan1,2
1Centre for Marine and Aquatic Research (CMAR), Saveetha Institute of Medical & Technical Sciences, Saveetha University, Chennai, India.
Abstract:
This study investigated the prevalence, diversity, and transcriptional activity of staphylococcal enterotoxin-like (SE-like) genes in marine fish and associated environmental samples from the southeast coast of India. A total of 769 Staphylococcus isolates obtained from fishermen, retail markets, frozen storage, and water- and ice-associated environments were screened for ten SE-like genes (seK, seL, seM, seN, seO, seP, seQ, seR, ssL1, and ssL2) using PCR, with representative amplicons sequenced for gene confirmation. SE-like gene-positive isolates were most frequently recovered from market fish (55.8%), followed by frozen fish (24.4%), water-associated samples (11.4%), and freshly collected fish (8.4%). Among the genes examined, seK (13.6%) and seL (13.0%) were predominant. Principal component and heat-map analyses demonstrated distinct gene distribution patterns among sample sources. In silico structural prediction revealed predominantly random-coil conformations (43-51%), along with β-strand and α-helical regions, predicted N-terminal signal peptides, and no transmembrane domains. These findings demonstrate the distribution of SE-like genetic determinants across seafood supply-chain stages, particularly in market-associated isolates. However, gene detection or transcription alone does not establish active enterotoxin production, pathogenicity, or direct public-health risk. Enhanced surveillance and improved hygiene practices are therefore warranted in seafood handling and retail environments.
Related Concept Videos
Clinical Significance of Antibiotic Resistance
Bacterial Gastroenteritis
Sources of Food Contamination
Reservoir of Infection
Applications of Molecular Taxonomy
Modern Molecular Taxonomy

