Related Experiment Video
Updated: Oct 1, 2026

In Vivo Calcium Imaging with a Miniaturized Microscope in the Hypothalamus for Understanding Social Behaviors in Mice
Published on: March 20, 2026
A head-mounted open-source light field microscope for large volumetric Ca2+ imaging during exploratory and social
Hao Li1, Tobias Nöbauer2, Hossein Sarafraz2
1Laboratory of Neurotechnology and Biophysics, The Rockefeller University, New York, NY 10065, USA; Kavli Neural System Institute, The Rockefeller University, New York, NY 10065, USA.
Abstract:
Capturing neuronal activity during natural behaviors in unrestrained animals is critical for understanding brain function, yet existing imaging systems struggle to combine volumetric field-of-view (v-FOV), high resolution, depth, and usability. We present MiniLFMv2, a lightweight, next-generation miniaturized light field microscope enabling volumetric imaging with a v-FOV of ⌀1 × 0.2 mm3, volume rates of up to 30 Hz and depth to ∼350-400 μm. MiniLFMv2 achieves near-diffraction-limited performance, with a working distance of 1 mm. Its custom aspheric lenses and electrically tunable lens eliminate the need for GRIN optics, improving compatibility with cranial window imaging. Applying MiniLFMv2 in freely moving mice, we captured activity from hundreds of parietal cortex neurons at depths up to ∼400 μm with minimal impact on mobility. During exploratory and social behaviors, we identified subpopulations selectively tuned to locomotion, rearing, and social investigation. MiniLFMv2 offers a powerful tool for investigating neural dynamics during naturalistic and social behaviors.

