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Updated: Oct 25, 2026

Using Scaffold Liposomes to Reconstitute Lipid-proximal Protein-protein Interactions In Vitro
Published on: January 11, 2017
Pathway-Dependent Energetics of SLC15A4-TASL Engagement: Single-Protomer Switching and Dimer-Interface Remodeling
Xiaoyu Zhao1,2,3, Danyang Xiong1, Feng Gao2,4,5
1Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, Shanghai Frontiers Science Center of Molecule Intelligent Syntheses, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai200062, China.
Abstract:
Membrane-embedded signalosome assembly is co-gated by conformational selection, oligomeric interfaces, and the lipid microenvironment, yet short-lived, tightly coupled intermediate states are hard to infer from static structures. SLC15A4 recruits TASL to support IRF5 signaling, but available structures largely capture distinct conformational endpoints, leaving assembly bottlenecks, interface/lipid coupling, and inhibitor interception without a quantitative energetic rationale. Here, we developed a computational energetic framework connecting the resting apo dimer to a TASL-permissive state. In the apo state, SLC15A4 maintained a persistent dimeric arrangement organized around a TM9/TM12-centered interfacial scaffold, while the interfacial cholesterol molecules maintained persistent contacts with the interface; luminal hydrophobic packing and a multivalent hydrogen-bond network around N428 were associated with interface persistence, while the dimer retained characteristic coupled motions of MFS helical bundles. Along the prescribed insertion pathway, TASL exhibited a pronounced apparent free-energy rise near the pocket, accompanied by rapid contact formation and a single-protomer switch from luminal-open to cytosolic-open, yielding a modeled asymmetric intermediate with altered cross-protomer interface geometry. TASL was stabilized by directional anchoring at a few key cationic sites. Pathway-dependent free-energy profiles further indicated that TASL engagement relaxed luminal-side interfacial stabilization and lowered the free-energy cost of inter-subunit separation without compromising pocket binding, potentially contributing to the formation of a signaling-competent SLC15A4-TASL module. Finally, our results suggest that an inhibitor limits access to the TASL-permissive state by locking the luminal-open conformation and occupying the central cavity, increasing the free-energy cost along the prescribed TASL entry and reshaping electrostatic determinants. Together, these results connect experimentally resolved structural states through a computational energetic framework in which TASL-associated single-protomer switching may couple to luminal interface weakening and reduced interface persistence, motivating therapeutic strategies targeting the SLC15A4-TASL-IRF5 axis via conformational locking and competitive cavity occupation.
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