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Updated: Oct 25, 2026

Sampling and Pretreatment of Tooth Enamel Carbonate for Stable Carbon and Oxygen Isotope Analysis
Published on: August 15, 2018
Effects of Pretreatment on the Isotopic Composition of Structural Carbonate in Ray-Finned Fish Teeth
Toshikazu Furuya1, Kazuki Yokouchi2, Taiga Okumura3
1Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba, Japan.
Rationale:
The carbon and oxygen stable isotope ratios (δ13C and δ18O) of carbonate contained in fish tooth dentin have the potential to offer insights into environmental and ecological conditions, making them promising targets for analysis in fossil specimens. However, the tooth dentin of extant specimens contains significant amounts of organic matter that can decompose or produce gases that interfere with isotope measurements. Therefore, a well-developed pretreatment protocol for removing organic components prior to isotopic analysis is essential.
Methods:
In this study, we developed pretreatment methods for removing organic matter to enable the isotopic analysis of structural carbonates in tooth dentin. Using teeth of the half-smooth golden pufferfish (Lagocephalus spadiceus) as specimens, we applied a total of eight physical and chemical pretreatment protocols and evaluated their effects on carbonate isotopic composition.
Results:
Treatments with neutral or alkaline pancreatin solutions effectively removed organic matter without altering the δ13C values of the carbonate. In contrast, no pretreatment method was identified that kept δ18O values entirely unaffected. However, treatment with the neutral pancreatin solution resulted in sufficient removal of organic matter and only minimal, consistent changes in δ18O.
Conclusions:
Treatments with neutral or alkaline pancreatin solutions are recommended for the analysis of δ13C in carbonate within dentin. Although no method for ideal organic matter removal without changing δ18O values was identified, treatment with neutral pancreatin solution is recommended as the second-best option. Because of the small and consistent change in δ18O, it is possible to correct for δ18O alterations induced by pretreatment.

