From Generative Molecular Design to Agentic Artificial Intelligence in Drug Discovery
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Updated: Nov 6, 2026

Structure-Guided Design and Development of Novel Cyclophilin A Inhibitors and Ganoderiol-F Derivatives: An In-Silico Approach
Published on: June 23, 2026
Andrea Mastropietro1,2,3, Jürgen Bajorath1,2
1Department of Life Science Informatics and Data Science, B-IT, LIMES Program Unit Chemical Biology and Medicinal Chemistry, Rheinische Friedrich-Wilhelms Universität, Bonn, Germany.
Abstract:
Over the past decade, artificial intelligence (AI) has increasingly influenced the early stages of drug discovery, which focus primarily on target evaluation and the design or identification of new active small molecules or biologics. Deep neural networks adapted from areas such as natural language processing and computer vision have provided novel opportunities for generative modeling and human-machine interactions. State-of-the-art AI models for generative molecular design have emerged, but remain only little understood so far. Furthermore, new computational systems are being devised rapidly that are expected to significantly transform the drug discovery landscape in the near future. These developments pose challenges to computer-aided drug discovery in various ways. In the following, we discuss these opportunities and challenges, with a focus on molecular design.
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