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Updated: Aug 8, 2026

In Vitro Transcription Assays and Their Application in Drug Discovery
Published on: September 20, 2016
Prolonged transcription in a cell-free system involving nuclei and cytoplasm
Abstract:
A cell-free system for nuclear-directed transcription has been developed that gives prolonged synthesis in the presence of cytoplasm. The nuclear and cytoplasmic components have been prepared from Krebs II ascites tumor cells for most experiments but further observations indicate that components prepared from other cell types may be used. After an initial 5- to 10-min period of relatively rapid RNA synthesis a linear rate ensues for 2-3 hr. In the absence of cytoplasm no net RNA synthesis occurs after the initial 10-min period. Experiments with alpha-amanitin suggest that about half of the cell-free synthesized RNA is made by RNA polymerase II, the enzyme believed to be responsible for messenger synthesis in vivo.The conditions used for RNA synthesis were derived from conditions found to be optimal for protein synthesis that proceeds linearly for 2-3 hr. It has not yet been possible to demonstrate the synthesis of protein from cell-free synthesized RNA in this system. A major problem here is that isolated nuclei, even when carefully washed, contain a great deal of translatable RNA.
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Transcription
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
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The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
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Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
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Transcription Can Produce Different Kinds of RNA Molecules
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Transcription in Prokaryotes

