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Updated: Aug 5, 2026

Metabolic Pathway Confirmation and Discovery Through 13C-labeling of Proteinogenic Amino Acids
Published on: January 26, 2012
The synthesis of amino acids by Methanobacterium omelianskii
Abstract:
1. Methanobacterium omelianskii was grown on (14)CO(2) and unlabelled ethanol, or on [1-(14)C]- or [2-(14)C]-ethanol and unlabelled carbon dioxide. The cell protein was hydrolysed and certain of the amino acids were isolated and degraded. 2. Carbon from both carbon dioxide and ethanol is used for biosynthesis of amino acids, and in most cases ethanol is incorporated as a C(2) unit. Ethanol carbon atoms and carbon dioxide carbon atoms apparently enter the same range of compounds. Ethanol and carbon dioxide are equally important as sources of cell carbon. 3. The origins of carbon atoms of aspartate, alanine, glycine, serine and threonine are consistent with the synthesis of these amino acids, by pathways known to exist in aerobic organisms, from pyruvate arising by a C(2)+C(1) condensation. The proportion of total radioactivity found in C-1 of lysine, proline, methionine and valine is consistent with synthesis of these amino acids by pathways similar to those found in Escherichia coli. Isoleucine is probably formed by carboxylation of a C(5) precursor formed entirely from ethanol. Glutamate is formed by an unknown pathway.
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