In vitro initiation of bacteriophage phi 29 and M2 DNA replication: genes required for formation of a complex between the terminal protein and 5'dAMP
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Updated: Sep 22, 2026

Following Cell-fate in E. coli After Infection by Phage Lambda
Published on: October 14, 2011
Abstract:
Cell-free extracts prepared from phi 29 and M2-infected Bacillus subtilis cells catalyse the formation of complexes between terminal protein and [alpha-32P]-dAMP in the presence of [alpha-32P]-dATP, MgCl2, ATP, and phage DNA with terminal protein covalently linked at both the 5'ends. The complex formation does not take place when proteinase K-treated DNA is added or when uninfected extract is used. The phi 29 complex thus formed is smaller than the M2 complex, primarily due to the different molecular weights of the respective terminal proteins. Extracts prepared from cells infected with suppressor-sensitive mutants of genes 2 or 3 of phi 29 or genes G or E of M2 do not support complex formation. When the pair of extracts of phi 29 or M2-infected cells are mixed, however, formation of the complex takes place as a result of in vitro complementation. These results indicate that the complex formation observed in vitro reflects in vivo initiation of phage DNA replication. The product of gene 2 of phi 29 may be the enzyme that catalyses formation of the complex.
Insights
Bacterial phage DNA replication initiation was studied using cell-free extracts. Phage DNA replication initiation involves terminal protein-dAMP complex formation, reflecting in vivo processes.
Area of Science:
- Molecular Biology
- Virology
- Biochemistry
Background:
- Bacterial viruses, such as phi 29 and M2, employ unique strategies for DNA replication initiation.
- Terminal protein (TP) is crucial for initiating replication in certain phages by forming a covalent linkage with the 5' ends of the DNA.
Purpose of the Study:
- To investigate the in vitro formation of the terminal protein-dAMP complex.
- To determine if this in vitro complex formation reflects the in vivo initiation of phage DNA replication.
Main Methods:
- Preparation of cell-free extracts from Bacillus subtilis infected with phi 29 or M2 phages.
- Assay for the formation of [alpha-32P]-dAMP-terminal protein complexes using radiolabeled nucleotides and phage DNA.
- Complementation assays using extracts from cells infected with various phage mutants.
Main Results:
- Cell-free extracts from phi 29 and M2 infected cells catalyzed the formation of TP-dAMP complexes.
- Complex formation was dependent on intact phage DNA and specific phage gene products, as evidenced by mutant studies and complementation.
- The size of the phi 29 complex differed from the M2 complex due to variations in terminal protein molecular weights.
Conclusions:
- In vitro TP-dAMP complex formation accurately reflects the in vivo initiation of phage DNA replication.
- The product of gene 2 of phi 29 is likely the enzyme responsible for catalyzing this initiation complex formation.
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