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Analyzing and Building Nucleic Acid Structures with 3DNA
Published on: April 26, 2013
How many base-pairs per turn does DNA have in solution and in chromatin? An answer from wide-angle X-ray scattering
Abstract:
Experimental excess wide-angle X-ray scattering curves from DNA in solution, from Na-DNA crystallites in mother-liquor, from mononucleosomes in solution and from nucleosome core histone complexes are compared with each other and with calculated excess scattering curves of DNA with variable number of base-pairs per turn. The DNA in the Na-DNA crystallites and in the mononucleosomes has on average the canonical B-conformation which is well-known from fibre-diagrams with 10 base-pairs per turn and a rise of 0.34 nm per base-pair. The averaged structure of DNA in solution differs from this conformation. The model which fits best this structure has 10.8 base-pairs per turn and a rise of 0.34 nm per base-pair.
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