Related Experiment Video
Updated: Sep 12, 2026

Highly Sensitive Assay for Measurement of Arenavirus-cell Attachment
Published on: March 2, 2016
The oligomerization reaction of the Semliki Forest virus membrane protein subunits
B U Barth1, J M Wahlberg, H Garoff
1Department of Molecular Biology, Karolinska Institute, Novum, Huddinge, Sweden.
Abstract:
The Semliki Forest virus (SFV) spike is composed of three copies of a membrane protein heterodimer. The two subunits of this heterodimer (p62 and E1) are synthesized sequentially from a common mRNA together with the capsid (C) in the order C-p62-E1. In this work heterodimerization of the spike proteins has been studied in BHK 21 cells. The results indicate that: (a) the polyprotein is cotranslationally cleaved into individual chains; (b) the two membrane protein subunits are initially not associated with each other in the endoplasmic reticulum (ER); (c) heterodimerization occurs predominantly between subunits that originate from the same translation product (heterodimerization in cis); (d) the kinetics of subunit association are very fast (t1/2 = 4 min); and (e) this heterodimerization is highly efficient. To explain the cis-directed heterodimerization reaction we suggest that the p62 protein, which is made before E1 during 26S mRNA translation, is retained at its translocation site until also the E1 chain has been synthesized and translocated at this same site. The mechanism for p62 retention could either be that the p62 anchor sequence cannot diffuse out from an "active" translocation site or that the p62 protein is complexed with a protein folding facilitating machinery that is physically linked to the translocation apparatus.
Insights
Semliki Forest virus (SFV) spike proteins p62 and E1 efficiently form heterodimers in cis during synthesis. This rapid association in the endoplasmic reticulum is crucial for viral structure and function.
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- The Semliki Forest virus (SFV) spike protein complex is essential for viral entry and is formed by heterodimers of p62 and E1 membrane proteins.
- These subunits are synthesized sequentially from a single mRNA precursor, alongside the capsid protein (C), in the order C-p62-E1.
Purpose of the Study:
- To investigate the process of spike protein heterodimerization for Semliki Forest virus (SFV) in BHK 21 cells.
- To elucidate the mechanism and kinetics of p62-E1 subunit association during viral protein synthesis.
Main Methods:
- Study of Semliki Forest virus (SFV) spike protein synthesis and assembly in BHK 21 cells.
- Analysis of polyprotein processing, subunit association in the endoplasmic reticulum, and heterodimerization kinetics.
Main Results:
- Polyprotein cleavage occurs during translation (cotranslational cleavage).
- p62 and E1 subunits are initially unassociated in the endoplasmic reticulum.
- Heterodimerization predominantly occurs between subunits synthesized from the same mRNA molecule (cis-heterodimerization) with rapid kinetics (t1/2 = 4 min) and high efficiency.
Conclusions:
- A model for cis-directed heterodimerization is proposed, suggesting p62 retention at the translocation site until E1 synthesis and translocation.
- p62 retention may involve its anchor sequence or association with protein folding machinery linked to the translocation apparatus.
Related Concept Videos
Protein Complex Assembly
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Leaky Scanning
Intralumenal Vesicles and Multivesicular Bodies
Coat Assembly and GTPases
Coat assembly depends on the local availability of phosphatidylinositol phosphates or PIPs and GTP-binding proteins. Adaptor proteins, which link the coat proteins to the membrane, bind to these PIPs and play a crucial role in controlling...
SNAREs and Membrane Fusion
SNAREs exist in pairs that symmetrically interact and catalyze the fusion of the lipid bilayers in vesicle and target organelle. v-SNARE in the vesicle membrane are single polypeptide chains that bind to a complementary t-SNARE, composed of 2...
Inhibitors of Virion Maturation and Assembly

