Two early replicated, developmentally controlled genes of Physarum display different patterns of DNA replication by

J D Diller1, H W Sauer

  • 1Department of Biology, Texas A&M University, College Station 77843.

Chromosoma
|September 1, 1993
PubMed

Insights

Physarum DNA replication origins vary. One gene has a single origin, while another has multiple, inefficient origins where replication forks meet and persist. This reveals diverse replication strategies in eukaryotes.

Area of Science:

  • Molecular Biology
  • Genetics
  • Cell Biology

Background:

  • Eukaryotic replication origin characterization is limited to select model organisms.
  • Understanding DNA replication origins is crucial for comprehending genome stability and inheritance.

Purpose of the Study:

  • To investigate the nature and usage of replication origins in the myxomycete Physarum.
  • To analyze the replication patterns of two developmentally regulated, early-replicating genes.

Main Methods:

  • Utilized highly synchronous Physarum plasmodia cultures.
  • Employed two-dimensional agarose gel electrophoresis for replication analysis.
  • Analyzed restriction fragment length polymorphisms (RFLPs) for allelic coordination.

Main Results:

  • Identified a single, discrete replication origin near the LAV1-5 gene.
  • Discovered multiple, inefficient origins within a 15 kb domain of the LAV1-2 gene.
  • Observed persistent replication fork collision structures within the LAV1-2 domain.

Conclusions:

  • Physarum exhibits diverse DNA replication origin strategies, including both fixed narrow origins and broader zones with multiple origins.
  • Replication of alleles on different parental chromosomes is highly coordinated.
  • The findings contribute to the understanding of eukaryotic DNA replication mechanisms.

Related Concept Videos

Replication in Prokaryotes02:35

Replication in Prokaryotes

Overview
Replication in Eukaryotes02:31

Replication in Eukaryotes

Overview
Polytene Chromosomes02:04

Polytene Chromosomes

Polytene chromosomes are giant interphase chromosomes with several DNA strands placed side by side. They were discovered in the year 1881 by Balbiani in salivary glands, intestine, muscles, malpighian tubules, and hypoderm of larvae Chironomus plumosus. Hence, these are also called "Salivary gland chromosomes." These are found in insects of the order Diptera and Collembola; in certain organs of mammals; and synergids, antipodes of flowering plants. Polytene chromosomes are also regularly...
DNA Agarose Gel Electrophoresis02:35

DNA Agarose Gel Electrophoresis

Agarose gel electrophoresis is a laboratory technique commonly used to separate DNA fragments by size. However, it can also be used to isolate and purify DNA fragments using a gel extraction protocol.
Gel extraction follows five major steps: running gel electrophoresis to separate fragments, isolating the individual bands, extracting DNA from those bands, and removing the dye and salts from the extracted mixture to obtain pure DNA.
In cloning experiments, both the insert and vector DNA...
S-Cdk Initiates DNA Replication02:38

S-Cdk Initiates DNA Replication

The cell cycle is a series of events leading to DNA duplication followed by the division of cell content to form two daughter cells. The cell cycle progresses in four stages—the cell increases in size (gap 1 or G1-phase), duplicates its DNA (synthesis or S-phase), prepares to divide (gap 2 or G2-phase), and divides (mitosis or M-phase).
Two states at the origin of replication
In eukaryotes, the initiation of replication occurs at many sites on the chromosomes, called the origins of replication.
Replication in Eukaryotes01:29

Replication in Eukaryotes

In eukaryotic cells, DNA replication is highly conserved and tightly regulated. Multiple linear chromosomes must be duplicated with high fidelity before cell division, so there are many proteins that fulfill specialized roles in the replication process. Replication occurs in three phases: initiation, elongation, and termination, and ends with two complete sets of chromosomes in the nucleus.
Many Proteins Orchestrate Replication at the Origin
Eukaryotic replication follows many of the same...