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Updated: Jun 3, 2026

Rescue of Recombinant Newcastle Disease Virus from cDNA
Published on: October 12, 2013
An avian oncovirus mutant (SE 21Q1b) deficient in genomic RNA: biological and biochemical characterization
Abstract:
We have isolated a nonconditional mutant of PR-RSV-E with unique properties. This virus (SE 21Q1b) is shed from a continuously growing culture of transformed quail cells. 21Q1b virions are unable to transform or replicate in other quail or chicken cells after exogenous infection, despite the fact that the viral particles contain normal envelope glycoproteins, internal structural proteins and RNA-dependent DNA polymerase. The lack of infectivity of 21Q1b virions is a consequence of the failure to package genomic 39S RNA. Instead, these virions contain a mixture of heterogenous-sized polyadenylated cellular RNAs and 4S RNA. Less than 1% of the encapsulated RNA is viral-specific, although in the 21Q1b-producing cells, amounts of 39S, 28S and 21S viral RNAs comparable to those in wild-type virus-infected cells are synthesized and function as mRNAs for the viral proteins. Thus 21Q1b can be considered an RNA packaging mutant. Superinfection of 21Q1b cells with either RAV-1 or PR-A leads to production of about 10% or more of the normal titer of superinfecting virus, but none of the 21Q1b genetic markers are rescued. After superinfection, the 21Q1b cells continue to synthesize 21Q1b particles containing cellular RNAs in the same amounts as before infection. Thus superinfection does not appear to "switch off" the aberrant packaging of cellular RNA, but allows packaging of the superinfecting RNA. One explanation for the phenotype of 21Q1b is that the genome is lacking a signal necessary for efficient genomic RNA packaging (but not for translation) and that the 21Q1b genome encodes a "packaging factor" with an altered specificity so that cellular RNAs are efficiently packaged. 21Q1b virions do contain RNA-dependent DNA polymerase which has normal endogenous synthetic activity. The cDNA product made in vitro from detergent-lysed 21Q1b virions hybridizes equally well to uninfected quail and 21Q1b-producing quail cell RNAs, with kinetics suggesting that the endogenous product consists of transcripts of cellular RNAs present in low amounts in the cells.
Insights
Researchers identified a Rous sarcoma virus mutant (SE 21Q1b) that fails to package its own RNA, instead packaging cellular RNA. This RNA packaging defect prevents viral replication and transformation, highlighting a critical step in retroviral assembly.
Area of Science:
- Virology
- Molecular Biology
- Genetics
Background:
- Avian retroviruses, such as Prague Rous Sarcoma Virus (PR-RSV-E), are crucial tools for studying cell transformation and viral replication.
- Viral RNA packaging is a complex process essential for the assembly of infectious virions.
- Understanding mutations affecting RNA packaging can elucidate the mechanisms of retroviral assembly and host-cell interactions.
Purpose of the Study:
- To characterize a novel nonconditional mutant of PR-RSV-E, designated SE 21Q1b, with distinct properties related to viral particle formation.
- To investigate the molecular basis for the observed defect in RNA packaging and its impact on viral infectivity.
- To explore the consequences of this packaging defect on viral gene expression and the potential for genetic rescue.
Main Methods:
- Isolation and continuous culture of a PR-RSV-E mutant (SE 21Q1b) from transformed quail cells.
- Analysis of viral particle composition, including RNA content and protein components.
- Infectivity assays to assess the transformation and replication potential of SE 21Q1b virions.
- Superinfection experiments with other retroviruses to evaluate genetic rescue and packaging interference.
Main Results:
- SE 21Q1b virions are produced by continuously growing transformed quail cells but are unable to infect or replicate in other cells.
- These virions contain cellular RNAs and 4S RNA instead of the genomic 39S RNA, indicating a failure in specific viral RNA packaging.
- Viral proteins and RNA-dependent DNA polymerase within SE 21Q1b virions are functional, and viral RNAs are synthesized and translated in producer cells.
- Superinfection allows packaging of superinfecting viral RNA but does not rescue SE 21Q1b genetic markers or correct the aberrant cellular RNA packaging.
Conclusions:
- SE 21Q1b represents an RNA packaging mutant of PR-RSV-E, characterized by the preferential packaging of cellular RNAs over viral genomic RNA.
- The mutation likely involves a defect in a signal required for efficient genomic RNA packaging or an altered packaging factor with changed specificity.
- This mutant provides a valuable model for studying the mechanisms of retroviral RNA selection and packaging, and the interplay between viral and cellular RNAs.
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