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EMBL-search: a CD-ROM based database query system

R Fuchs1, P Stoehr

  • 1European Molecular Biology Laboratory, Heidelberg, Germany.

Computer Applications in the Biosciences : CABIOS
|February 1, 1993
PubMed
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This study introduces EMBL-Search, a user-friendly program for accessing EMBL sequence databases on CD-ROM. It simplifies complex queries and navigation, offering a cost-effective solution for researchers.

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Database Management

Background:

  • Accessing large biological sequence databases like EMBL can be challenging.
  • Developing efficient front-end software for CD-ROM based databases requires specialized tools.
  • Navigating complex cross-referenced data requires intuitive interfaces.

Purpose of the Study:

  • To describe a system of index files for EMBL sequence databases on CD-ROM.
  • To introduce EMBL-Search, a versatile database retrieval program for Apple Macintosh.
  • To enhance user-friendliness and efficiency in accessing biological sequence data.

Main Methods:

  • Development of generally applicable index files for EMBL sequence databases.
  • Implementation of a new database retrieval program, EMBL-Search, for Apple Macintosh.

Related Experiment Videos

  • Utilization of cross-reference information for inter-resource navigation.

    • Main Results:

    • EMBL-Search enables easy construction of complex database queries.
    • The program facilitates navigation between different information resources within the databases.
    • Running EMBL-Search on a local network with shared CD-ROMs proves cost-effective.

    Conclusions:

    • The described index files and EMBL-Search program significantly improve access to EMBL sequence databases.
    • The system offers a user-friendly and efficient solution for biological data retrieval.
    • Cost-effectiveness is achieved through network-based access to shared CD-ROM resources.