Fractionation of perforin and granzymes by immobilized metal affinity chromatography (IMAC)

Cytotoxic lymphocytes and natural killer cells kill their targets by releasing pore-forming granules or by Fas ligand-Fas initiated death. The granules contain the pore-forming protein perforin, proteoglycan and multiple serine proteases termed granzymes. In this paper we describe two options for isolating perforin and granzymes. Both options separate the proteins by their ability to bind to immobilized metal affinity chromatography (IMAC) columns. The first option, with Cu2+ as the metal (Cu2+-IMAC), separates both perforin and granzymes while the second, with Co2+ as the metal (Co2+-IMAC), separates only perforin. After Cu2+-IMAC perforin is > 20-fold enriched with excellent recovery of lytic activity. Only two proteins are substantial contaminants. After Cu2+-IMAC, the perforin is dilute and requires concentration before additional steps of purification. The second option, with Co2+ as the metal Co2+-IMAC), yields perforin that is concentrated in a sharp peak. The concentrated perforin is immediately suitable for further purification. The first option, with Cu2+, isolates the granzymes while the second option, Co2+-IMAC, does not. After isolation, the perforin lytic and granzyme activities are stable for weeks at 4 degrees C, an advantage to previous isolation methods for these proteins. The excellent recoveries of perforin and granzymes also indicate that these proteins are less than 4% and 15% of the total lymphocyte granule protein, respectively.