The phosphofructokinase-uncharged tRNA interaction in metabolic and cell cycle control: an interpretive review

M Rabinovitz1

  • 1Laboratory of Molecular Pharmacology, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.

Insights

Uncharged transfer RNA (tRNA) inhibits phosphofructokinase (PFK), a key enzyme in glycolysis. This inhibition limits cell function and protein synthesis, particularly during amino acid deficiency, impacting the cell cycle.

Area of Science:

  • Biochemistry
  • Cell Biology
  • Molecular Biology

Background:

  • In mammalian cells, incomplete tRNA charging due to amino acid deficiency or analogs limits metabolic events.
  • Uncharged tRNA inhibits phosphofructokinase (PFK), leading to rapid cell function decline.
  • Charged tRNA is sequestered within the protein synthetic machinery, preventing its inhibitory role.

Purpose of the Study:

  • To elucidate the mechanism linking incomplete tRNA charging to cellular metabolic and functional limitations.
  • To investigate the role of phosphofructokinase (PFK) inhibition by uncharged tRNA in cellular processes.
  • To understand the connection between PFK activity, fructose-1,6-diphosphate, and protein synthesis regulation.

Main Methods:

  • Direct demonstration of tRNA inhibition of PFK in vitro.
  • Analysis of cellular responses to amino acid deficiency, including glycolysis and glucose uptake.
  • Examination of ribosomal subunit function and cAMP's role in protein synthesis.
  • Assessment of fructose-1,6-diphosphate's effect on protein synthesis and its interaction with eIF-2B.

Main Results:

  • Uncharged tRNA directly inhibits PFK activity.
  • Amino acid deficiency rapidly inhibits glycolysis and glucose uptake in intact cells.
  • Fructose-1,6-diphosphate, a PFK product, stimulates protein synthesis by activating the guanine nucleotide exchange factor eIF-2B.

Conclusions:

  • The phosphofructokinase-uncharged tRNA mechanism explains the G1 cell cycle block induced by amino acid deprivation.
  • This pathway links amino acid availability to protein synthesis initiation and cell cycle progression.
  • Tumor and transformed cells, resistant to this block, exhibit higher PFK activity and fructose-1,6-diphosphate levels.

Related Concept Videos

Phosphorylation01:02

Phosphorylation

The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
What is Glycolysis?00:56

What is Glycolysis?

Overview
Cells make energy by breaking down macromolecules. Cellular respiration is the biochemical process that converts "food energy" (from the chemical bonds of macromolecules) into chemical energy in the form of adenosine triphosphate (ATP). The first step of this tightly regulated and intricate process is glycolysis. The word glycolysis originates from the Latin glyco (sugar) and lysis (breakdown). Glycolysis serves two main intracellular functions: generating ATP and generating...
Phosphorylation01:02

Phosphorylation

The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
Protein Kinases and Phosphatases02:54

Protein Kinases and Phosphatases

Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
ATP Driven Pumps I: An Overview01:27

ATP Driven Pumps I: An Overview

ATP-driven pumps, also known as transport ATPases, are integral membrane proteins. They have binding sites for ATP located on the membrane's cytosolic side and the ion-conducting domain in the transmembrane region. These pumps use the free energy released from ATP hydrolysis to move the solutes across cell membranes against an electrochemical gradient.
There are four main types of ATP-driven pumps - P-type, V-type, F-type, and ABC transporter. All these pumps are of varying complexities and are...
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...