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Updated: Aug 12, 2026

Crystal Structure of the N-terminal Domain of Ryanodine Receptor from Plutella xylostella
Published on: November 30, 2018
Crystal structure of the anti-fungal target N-myristoyl transferase
S A Weston1, R Camble, J Colls
1Zeneca Pharmaceuticals, Macclesfield, UK.
Abstract:
N-myristoyl transferase (NMT) catalyzes the transfer of the fatty acid myristate from myristoyl-CoA to the N-terminal glycine of substrate proteins, and is found only in eukaryotic cells. The enzyme in this study is the 451 amino acid protein produced by Candida albicans, a yeast responsible for the majority of systemic infections in immuno-compromised humans. NMT activity is essential for vegetative growth, and the structure was determined in order to assist in the discovery of a selective inhibitor of NMT which could be developed as an anti-fungal drug. NMT has no sequence homology with other protein sequences and has a novel alpha/beta fold which shows internal two-fold symmetry, which may be a result of gene duplication. On one face of the protein there is a long, curved, relatively uncharged groove, at the center of which is a deep pocket. The pocket floor is negatively charged due to the vicinity of the C-terminal carboxylate and a nearby conserved glutamic acid residue, which separates the pocket from a cavity. These observations, considered alongside the positions of residues whose mutation affects substrate binding and activity, suggest that the groove and pocket are the sites of substrate binding and the floor of the pocket is the catalytic center.
Insights
N-myristoyl transferase (NMT) is crucial for Candida albicans growth. Determining its structure aids in developing new antifungal drugs by targeting this essential enzyme.
Area of Science:
- Biochemistry
- Structural Biology
- Mycology
Background:
- N-myristoyl transferase (NMT) catalyzes essential protein modification in eukaryotes.
- Candida albicans NMT is vital for fungal growth and a target for antifungal drug development.
- The enzyme exhibits no sequence homology to other proteins and possesses a unique alpha/beta fold.
Purpose of the Study:
- To determine the structure of Candida albicans NMT.
- To provide insights for the rational design of selective NMT inhibitors.
- To facilitate the development of novel antifungal therapies.
Main Methods:
- Protein structure determination (details not specified in abstract).
Main Results:
- The NMT structure reveals a novel alpha/beta fold with internal two-fold symmetry.
- A prominent groove and deep pocket were identified on the protein surface.
- The pocket floor, characterized by negative charge and proximity to a conserved glutamic acid, is proposed as the catalytic center.
Conclusions:
- The identified groove and pocket are suggested as substrate-binding sites.
- The negatively charged pocket floor is implicated as the catalytic center of NMT.
- Structural insights into C. albicans NMT can guide the development of targeted antifungal agents.
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