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Nature Genetics|August 15, 2017
Lineage-specific dynamic and pre-established enhancer-promoter contacts cooperate in terminal differentiationAdam J Rubin, Brook C Barajas, Mayra Furlan-Magaril, et al.Nature Genetics|October 15, 2021
The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiationDaniel S Kim, Viviana I Risca, David L Reynolds, et al.Cell|June 25, 2020
Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell CarcinomaAndrew L Ji, Adam J Rubin, Kim Thrane, et al.Nature Methods|May 29, 2019
HiChIRP reveals RNA-associated chromosome conformationMaxwell R Mumbach, Jeffrey M Granja, Ryan A Flynn, et al.The Journal of Investigative Dermatology|May 4, 2023
Single-Cell and Spatial Transcriptomic Analysis of Human Skin Delineates Intercellular Communication and Pathogenic CellsKim Thrane, Mårten C G Winge, Hongyu Wang, et al.Nature Methods|August 29, 2017
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissuesM Ryan Corces, Alexandro E Trevino, Emily G Hamilton, et al.Nature Medicine|April 25, 2018
Transcript-indexed ATAC-seq for precision immune profilingAnsuman T Satpathy, Naresha Saligrama, Jason D Buenrostro, et al.Nature Genetics|September 26, 2017
Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elementsMaxwell R Mumbach, Ansuman T Satpathy, Evan A Boyle, et al.Biorxiv : the Preprint Server for Biology|December 11, 2023
Chronic metabolic stress drives developmental programs and loss of tissue functions in non-transformed liver that mirror tumor states and stratify survivalConstantine N Tzouanas, Marc S Sherman, Jessica E S Shay, et al.Cell|December 23, 2025
Hepatic adaptation to chronic metabolic stress primes tumorigenesisConstantine N Tzouanas, Jessica E S Shay, Marc S Sherman, et al.Pageof 2