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Current Opinion in Structural Biology|April 28, 2012
Modeling nucleic acidsAdelene Y L Sim, Peter Minary, Michael LevittProceedings of the National Academy of Sciences of the United States of America|February 7, 2012
Modeling and design by hierarchical natural movesAdelene Y L Sim, Michael Levitt, Peter MinaryProceedings of the National Academy of Sciences of the United States of America|February 15, 2011
Clustering to identify RNA conformations constrained by secondary structureAdelene Y L Sim, Michael LevittJournal of Bioinformatics and Computational Biology|July 20, 2012
Evaluating mixture models for building RNA knowledge-based potentialsAdelene Y L Sim, Olivier Schwander, Michael Levitt, et al.RNA (New York, N.Y.)|April 28, 2011
Fully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluationJulie Bernauer, Xuhui Huang, Adelene Y L Sim, et al.Journal of Chemical Information and Modeling|August 9, 2016
Tertiary Element Interaction in HIV-1 TARKonrad Krawczyk, Adelene Y L Sim, Bernhard Knapp, et al.Proceedings of the National Academy of Sciences of the United States of America|April 16, 2014
Training-free atomistic prediction of nucleosome occupancyPeter Minary, Michael LevittJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|August 24, 2010
Conformational optimization with natural degrees of freedom: a novel stochastic chain closure algorithmPeter Minary, Michael LevittJournal of Molecular Biology|December 7, 2007
Probing protein fold space with a simplified modelPeter Minary, Michael LevittProceedings of the National Academy of Sciences of the United States of America|June 6, 2012
Multiscale natural moves refine macromolecules using single-particle electron microscopy projection imagesJunjie Zhang, Peter Minary, Michael LevittPageof 22