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Plos One|January 24, 2014
Recruiting human microbiome shotgun data to site-specific reference genomesGary Xie, Chien-Chi Lo, Matthew Scholz, et al.BJC Reports|May 4, 2026
Significance and challenges in dissecting cancer-bacteriome interactionsIbraheem Alshareedah, James D Brunner, Patrick S G Chain, et al.BMC Bioinformatics|March 2, 2016
ADEPT, a dynamic next generation sequencing data error-detection program with trimmingShihai Feng, Chien-Chi Lo, Po-E Li, et al.Journal of Microbiological Methods|November 7, 2016
Methodologies for probing the metatranscriptome of grassland soilAaron Garoutte, Erick Cardenas, James Tiedje, et al.Journal of Virological Methods|September 30, 2014
Metagenomic approaches for direct and cell culture evaluation of the virological quality of wastewaterTiong Gim Aw, Adina Howe, Joan B RoseFrontiers in Microbiology|August 8, 2014
Demonstrating microbial co-occurrence pattern analyses within and between ecosystemsRyan J Williams, Adina Howe, Kirsten S HofmockelEnvironmental Microbiology|August 20, 2015
Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winterLucia Žifčáková, Tomáš Větrovský, Adina Howe, et al.Microbiology Spectrum|May 22, 2026
Dairy manure reception pits as reservoirs of extracellular DNA-associated antibiotic resistance genesNajmuj Sakib, Daniel Andersen, Laura Jarboe, et al.Microorganisms|May 28, 2022
Comparative Genomics Applied to Systematically Assess Pathogenicity Potential in Shiga Toxin-Producing Escherichia coli O145:H28Michelle Qiu Carter, Nicole Laniohan, Chien-Chi Lo, et al.Msystems|March 6, 2019
RefSoil+: a Reference Database for Genes and Traits of Soil PlasmidsTaylor K Dunivin, Jinlyung Choi, Adina Howe, et al.Pageof 17